Gene Sked_11820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_11820 
Symbol 
ID8632818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1369795 
End bp1370904 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003313959 
Protein GI269794504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.15123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGGAC CAGACGCCAT CGACACCGAC CTGCGGACCC CACGCCCCAC GACCCCCTCG 
TGGCGCGCCA CGTACCTCGG GTCGGACACC CGCGACGGCT CGGCGAACAT CTCGTGGGGC
TCCGTCCTCG CCGGGGTCGT CACCTTCCTC GCGCTCGTCG TCACCTTCTC CCTCATCGGC
ACCGCCATCG GGCTCGGCGG GGTCGACCCG GCCTCCGACA ACCCCCTCGA CGGCGTCGGC
ACCGGTCTGA CCATCTGGGC CGTCCTCACG CTCCTCGTCT CGCTCGCCGG TGCCGGCTTC
GTCTCCGGGG TCCTCGCGGT CCGCGCAGGC TTCATGCACG GAGTGGTCAC CTGGGCCACC
GGCGTCATCG CCTTCGTGGT GCTCCTCGGC CTCCTCGCCT CGGCCGCCTT CGGCGCCATC
GGCTCGCTCG TCAGCGGTGC CGCCTCGACC GTCGGGGGCG CGGCGTCGAG CGTGGCCGAC
CTCGCCGGGG ACGGCGTGAA CAAGGCCATC GACGGCGTCT CCGACCAGCT CGGCGACATC
GACGCGGCCT CGGTCGACCA GCAGACCCAG GACATCCTCG TCGGCACCGG CGTCCCCGAG
CTCCAGCCCG GGTACCTCCA GGACCAGGTC GACGCCGCCG GCACCGAGAT CAGCGACGCC
GGAGTCGACC TGCTGACCAA CCCGGACGAC GCCGACACGA TCCTCGACGA CCTCACCACG
TCCCTCGAGG ACCGCGTCAC GACCATCACC GACGCGGTCG ACCGCGACGC GATCACCCGG
TCTGTCGCGG AGAACACCGA CCTCACCGGC ACCGAGGCCG AGGAGGCCGT CAGCACGATC
GAGCAGGGGC TGCAGTCCGC CGGCCAGTCC GCGCAGGACA TGCTCGACGG TGCGGCCTCA
GCCCTCGCCG ACGCGCGGGA GACCATCTCC GAGCAGATCG ACCAGGCGCG TCAGACCGCT
GACGACATCT CGGACTCCGT CGCCCGCGCC GCCGGCTGGG TGTTCGTCGC ACTGGTCCTC
GGGCTCGCCG TGACCGCGTT CGCCGCGCTG CTCGGCTCGC GCCTCGTCGT CGGACGGGAC
TCCGCAGGCC GGGTCACCCG CCAGGGCTGA
 
Protein sequence
MPGPDAIDTD LRTPRPTTPS WRATYLGSDT RDGSANISWG SVLAGVVTFL ALVVTFSLIG 
TAIGLGGVDP ASDNPLDGVG TGLTIWAVLT LLVSLAGAGF VSGVLAVRAG FMHGVVTWAT
GVIAFVVLLG LLASAAFGAI GSLVSGAAST VGGAASSVAD LAGDGVNKAI DGVSDQLGDI
DAASVDQQTQ DILVGTGVPE LQPGYLQDQV DAAGTEISDA GVDLLTNPDD ADTILDDLTT
SLEDRVTTIT DAVDRDAITR SVAENTDLTG TEAEEAVSTI EQGLQSAGQS AQDMLDGAAS
ALADARETIS EQIDQARQTA DDISDSVARA AGWVFVALVL GLAVTAFAAL LGSRLVVGRD
SAGRVTRQG