Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_11570 |
Symbol | |
ID | 8632793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1338813 |
End bp | 1341170 |
Gene Length | 2358 bp |
Protein Length | 785 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | beta-glucosidase-like glycosyl hydrolase |
Protein accession | YP_003313934 |
Protein GI | 269794479 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0110088 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCACC AGGCCACCGC CCCGGCGCGG ATCCCGCTGC CGCAGGTCTC CGAGAGGGTC GCGCGGCTGC ACGCCCAGAT GACCCTCGAC GAGAAGCTCG CCCAGCTGGT CGGCTACTGG GTGGACCAGG GCGGCGAGGT CGTCGCGCCC ATGCAGGGGG AGATGGCCAC CTCGGGCCAC TACGAGGAGG CGACCGCGCA CGGGCTCGGG CACCTCACCC GGGTGTACGG CACCCGGCCG GTCGACCCGG TCGAGCGCGC CGCGTGGCTC TGGGGAGAGC AGCGCCGGCT CGTCCGCGAG ACACGGCTGG GCATCCCCGC GCTCGTCCAC GAGGAGTGCC TCACCGGTCT CGCCGCCTGG AAGGCCGCGA CCTTCCCGAC ACCGCTCGCC TGGGGAGCGT CCTTCGACCC GGGCCTCGTC GCGGAGATGG GCGCCGCGAT CGGTACCTCG ATGCGCACGC TCGGCATCCA CCAGGGGCTC GCCCCCGTCC TCGACGTGAT CCGCGACCCC CGCTGGGGCC GGGTCGACGA GTGCATCGCC GAGGACCCGT ACGTGGTCGG CACCATCGGC ACCGCCTACG TCCAGGGCCT CCAGTCCGAG GGCGTGCACG CCACGCTCAA GCACTTCGTC GGGTACTCCG CCTCTCGTGC CGGCCGCAAC CACGCCCCCG TCCACGCCGG TCCCCGGGAG ATCGCCGACG TGCTCCTGCC GCCCTTCGAG ATGGCGGTGC TCGACGGCGG GGTGCGGTCG GTGATGAACT CCTACGCCGA GATCGACGGC ATCCCCGTCG CCGCGGACCC CACCTATCTC ACGGGTGTGC TCCGCGACCT CTGGGGCTTC GACGGCGTCG TGGTCTCCGA CTACTTCACC GTCGCGTTCC TCGAGGTCAT GCACGCGGTC GCCGCCGACC GCGGCGAGGC GGCCTCCCTC GCGCTCGCGG CCGGCATCGA CGTCGAGCTG CCCACCGGCG ACGCCTACAC CGGCCCGCTC GCCGAGAAGG TCCGTGCCGG GCTGGTCGAC GAGGCGCTCG TCGACCGTGC CGTGCTGCGT GCCCTCGCGC AGAAGGAAGA GCTCGGTCTG CTCGACGCCC GCTTCGACGA CGCGCCGCCG ACCGCGGTCG ACCTCGACCC CGCCGGGCAC CGGGACGTCG CACGACGCCT CGCCGAGGAG TCCCTGGTGC TGCTGACCAA CGACGGGACA CTGCCGCTCC TGCCAGGAGA CGGGCCGGCG CCCTCCCGCG TCGCCGTGAT CGGTCCGAAC GCGGACCGGG CCGAGGCGCT CATGGGCTGC TACTCCTTCG CGAACCACGT GCTCGCGCAC CACCCGGACC ACGAGATCGG CATCGAGATC CCGACGGTCG TCGAGGCGCT CCGCGACGAG CTCCGCGGCG CAGCGCCGGG GACCGTCGTC GAGCACGCAC CCGGCTGCGC CGTCGAGGGC GAGGACAGGT CGGGGTTCGA GGACGCCGCG GCGCTCGCGG CCCGCTCCGA CGTCGCCGTC GTGGTGCTCG GCGACCAGGC CGGGCTCTTC GGCCGCGGCA CGGTGGGAGA GGGCAACGAC GTCGAGTCCC TCGACCTGCC CGGGGTCCAG CGGGAGCTGG TCGAGGCGGT CGCCGCCACG GGCACGCCGG TGGTCGTGGT GCTGCTCACC GGCCGGCCGT ACGCCGTGGA CTGGGCGGTC GGTGGACCTG GAGCACCGCG AGCGGTGGTC CAGTCGTTCT TCCCGGGGGA GGAGGGTGGC CGCGCGATCG CCGGGGTCCT GTCGGGACGG GTCGCCCCCT CGGGGCGCCT TCCCGTGAGC ATGCCGCGCT CTGCCGGTGC GCAGCCGTAC TCGTACCTGC ACCCCGTCCT CGGCGGACCG TCCGAGGTGA CCAGCACGGA CAGCACACCG CTGCTGCCCT TCGGTCACGG TCTGACGTAC ACGACCTTCG AGCGCACAGC GCTCACGGTT GACGCCGAGG TGCTCGCCGG CGACGCCTTC TCCGCCACGG TCCAGGTGAC GAACACGGGG GAGCGCGCCG GGACGGACGT CGTCCAGCTC TACGCCCGCG ACGTCGTCGG GTCGGTGACA CGGCCCGTCG CGCAGCTGCT CGGCTACGCC CGGGTCGACC TCGACCCGGG GGAGAGCGTC GTGGTGCGCC TCGACGTCCC GACCGCGCGC CTGGCGTTCT CGGACCGCTC GATGGTGCGG GTCGTCGAGC CCGGCGAGGT CGAGCTGTGG GTCGGCCCGT CGTGCGCCGA GAAGGAGACC ACGGCGTCGC TGACGATCAC CGGTCCTCTG CACGAGGTGA CGCTCGCCGA CGCGCGGACC GTGCGCACCG AGGTGCTGCG GACCACAGAA GCAGCGCTGG GGCGCTGA
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Protein sequence | MNHQATAPAR IPLPQVSERV ARLHAQMTLD EKLAQLVGYW VDQGGEVVAP MQGEMATSGH YEEATAHGLG HLTRVYGTRP VDPVERAAWL WGEQRRLVRE TRLGIPALVH EECLTGLAAW KAATFPTPLA WGASFDPGLV AEMGAAIGTS MRTLGIHQGL APVLDVIRDP RWGRVDECIA EDPYVVGTIG TAYVQGLQSE GVHATLKHFV GYSASRAGRN HAPVHAGPRE IADVLLPPFE MAVLDGGVRS VMNSYAEIDG IPVAADPTYL TGVLRDLWGF DGVVVSDYFT VAFLEVMHAV AADRGEAASL ALAAGIDVEL PTGDAYTGPL AEKVRAGLVD EALVDRAVLR ALAQKEELGL LDARFDDAPP TAVDLDPAGH RDVARRLAEE SLVLLTNDGT LPLLPGDGPA PSRVAVIGPN ADRAEALMGC YSFANHVLAH HPDHEIGIEI PTVVEALRDE LRGAAPGTVV EHAPGCAVEG EDRSGFEDAA ALAARSDVAV VVLGDQAGLF GRGTVGEGND VESLDLPGVQ RELVEAVAAT GTPVVVVLLT GRPYAVDWAV GGPGAPRAVV QSFFPGEEGG RAIAGVLSGR VAPSGRLPVS MPRSAGAQPY SYLHPVLGGP SEVTSTDSTP LLPFGHGLTY TTFERTALTV DAEVLAGDAF SATVQVTNTG ERAGTDVVQL YARDVVGSVT RPVAQLLGYA RVDLDPGESV VVRLDVPTAR LAFSDRSMVR VVEPGEVELW VGPSCAEKET TASLTITGPL HEVTLADART VRTEVLRTTE AALGR
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