Gene Sked_11400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_11400 
Symbol 
ID8632776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1322901 
End bp1323221 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content63% 
IMG OID 
ProductLSU ribosomal protein L21P 
Protein accessionYP_003313918 
Protein GI269794463 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.103652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00107397 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAGCA ACGTGGTGTA CGCGATCGTC AAGGCCGGTG GCCGCCAGGA GAAGGTTTCC 
GTGGGCGACG TCGTCGTCGT CGACCGACTT TCCGGCGACG CTGGCGAGTC CATCGAACTT
CCCGCGCTGC TTCTGGTCGA CGGGGAGAAG GTGACGACCA AGGCAGCAGA CCTCGCCAAG
GTCAAGGTCA CCGCGGAGAT CGTCCGGGAC GAGAAGGGCC CGAAGATCAC CATCCTCAAG
TTCAAGAACA AGACCGGCTA CCGCAAGCGT CAGGGTCACC GTCAGCAGCT GACCCGCCTG
AAGGTCACCG GCATCAAGTG A
 
Protein sequence
MSSNVVYAIV KAGGRQEKVS VGDVVVVDRL SGDAGESIEL PALLLVDGEK VTTKAADLAK 
VKVTAEIVRD EKGPKITILK FKNKTGYRKR QGHRQQLTRL KVTGIK