Gene Sked_11150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_11150 
Symbol 
ID8632751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1293447 
End bp1294643 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content75% 
IMG OID 
Productcystathionine beta-lyase/cystathionine gamma-synthase 
Protein accessionYP_003313893 
Protein GI269794438 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0840629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACG CGTCGACGAC CCCCGGGACC ACCGCTCAGC ACAGCCCTCA CGGCCCGGCG 
TCGCCGGCGC TCTCCCCGGC GACCGTCGCG GTCGCCGCAG GGCGGCCGCC GCGGGTCTCG
GGCGGCCCGG TGAACCCACC GGTGGTGCTC TCGTCGACCT ACGTCTCGGC CGGTGTCCCC
TCCCCCGACG AGAAGCTCTA CACCCGCGCC GGGACCGAGA CCTGGGAGCC CTTCGAGGAC
GCGATCGCCC AGCTCGAGGG GGCGTCCCAG AGCGGGGTCG TCTTCGCCTC CGGCATGGCG
GCGATCGCCT CGGTCCTCGC GATGGTCCCC GACGGCGGCA CCGTGGTGGT GCCGCGGCAC
GCCTACCAGG TCACCCTCGG GTTCGTCGAC GACATGGCCG AGCGCCACCG GGTGACGGTC
CGCCGGGTCG ACATCGCGGA CACCGAGGCC TCGGTCGCGG CCTTCGCCGG CGCCGACCTC
GTGTGGGTCG AGTCACCCAC CAACCCGATG CTCGAGGTCG CGGACCTCCC CGTCCTCATC
GACGCGGCGC ACCGCGCCGG CGCCCTCGTC GCGGTCGACA ACACCTTCGC GACCCCGCTC
GTGCAGCGCC CCCTGGAGTC CGGTGCGGAC CTCGTGGTGC ACTCGGTGAC CAAGTACCTC
GCCGGCCACT CCGACGTCGT CCTCGGGGCC GTCGTGACGA GCTCGGAGCA CCTCGAGCGG
TCGGTCCGCG CCTACCGCAC GCTGCACGGC GCGATCGCCG GGCCGTGGGA GGTCTGGCTC
GCGCTGCGCG GCCTGCGGAC CCTCGCGCTG CGCGTCGAGC GCGCGCAGGC GAACGCCGCC
GAGATCGCCC ACCGGCTGTC CGGCCACCCG TCGGTCGCCG AGGTCCGGCA CCCGTCGCTG
CCCGACGACC CGGGGCACGA GGTCGCGACC CGCGTCATGG ACGGGTACGG CGCGATCATC
GGCCTGCGCC CCGTGGGCGG GGTCGAGGCG GCCGACGCGG TCGTCGACGC CCTCGCGCTG
TGGGTCCCCG CCACGAGCCT CGGCGGGGTC GAGTCGAGCC TCGAGCGACG ACGTCGCTTC
ACGACCGAGT CCCCCACGGT CCCCGAGGAC CTGCTGCGCA TGAGCGTCGG CATCGAGGAC
GTCGAGGACC TCTGGGCCGA CCTCGACCAG GCGCTGCGGC GCGTCACAGG AGCCTGA
 
Protein sequence
MDDASTTPGT TAQHSPHGPA SPALSPATVA VAAGRPPRVS GGPVNPPVVL SSTYVSAGVP 
SPDEKLYTRA GTETWEPFED AIAQLEGASQ SGVVFASGMA AIASVLAMVP DGGTVVVPRH
AYQVTLGFVD DMAERHRVTV RRVDIADTEA SVAAFAGADL VWVESPTNPM LEVADLPVLI
DAAHRAGALV AVDNTFATPL VQRPLESGAD LVVHSVTKYL AGHSDVVLGA VVTSSEHLER
SVRAYRTLHG AIAGPWEVWL ALRGLRTLAL RVERAQANAA EIAHRLSGHP SVAEVRHPSL
PDDPGHEVAT RVMDGYGAII GLRPVGGVEA ADAVVDALAL WVPATSLGGV ESSLERRRRF
TTESPTVPED LLRMSVGIED VEDLWADLDQ ALRRVTGA