Gene Sked_11090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_11090 
Symbol 
ID8632745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1287081 
End bp1287800 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content75% 
IMG OID 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003313887 
Protein GI269794432 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATT CTAGCGGAGT CGGAGTGCTC GACAAGGCAG CATCCGTTTT GGGTGCTCTC 
GAGGCAGGCC CGGCCACCCT CGCACAGCTC GTCGCGGCCA CCCGCCTGGC CCGCCCCACG
GCCCATCGCC TGGCCGTGGC GCTCGAGCAC CACCGCCTCG TCACCCGCGA CATGCAGGGC
AGGTTCGTGC TCGGCCCGCG CCTCAACGAG CTCGCCACGG CCGCCGGCGA GGACCGCCTG
CTCGCCGCCG CGAACCCCGT GCTGACCGCG CTGCGCGACC ACACGGGCGA GAGCGCCCAG
CTGTACCGCC GCCAGGGCGA CCAGCGCATC TGCGTGGCCG CCGCCGAGCG CCCGGTCGGC
CTGCGCGACT CCATCCCCGT GGGGGCGACC CTCACCATGC ACGCCGGGTC TGCCGCGCAG
ATCCTGCTCG CGTGGGAGGA GCCGGACCGT CTGCACCGCG GGCTCCAGGG CGCCAAGTTC
ACCGCGACCA TCCTGTCCGG CGTCCGCCGC CGCGGCTGGG CACAGTCGGT GTCCGAGCGC
GAGGTCGGCG TCGCGTCGGT CTCCGCCCCC GTGCGCGGGC CGTCGGGGCG CATCGTCGCG
GCCGTGTCCA TCTCTGGGCC CGTCGAGCGC CTGAGCCGCC AGCCCGGACG CCTGCACGCC
GGCTCCGTCG TGGCAGCAGC CAACCGCCTC ACCGAGGTGC TGCGCCGCTC CGGCGAGTAG
 
Protein sequence
MDNSSGVGVL DKAASVLGAL EAGPATLAQL VAATRLARPT AHRLAVALEH HRLVTRDMQG 
RFVLGPRLNE LATAAGEDRL LAAANPVLTA LRDHTGESAQ LYRRQGDQRI CVAAAERPVG
LRDSIPVGAT LTMHAGSAAQ ILLAWEEPDR LHRGLQGAKF TATILSGVRR RGWAQSVSER
EVGVASVSAP VRGPSGRIVA AVSISGPVER LSRQPGRLHA GSVVAAANRL TEVLRRSGE