Gene Sked_10940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_10940 
Symbol 
ID8632730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1274078 
End bp1274965 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003313874 
Protein GI269794419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.470015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCACCC AGACCGCCCT CTCCCACGAC ACGTGGGCCC CGCTCGCCGC GGCGCACGCC 
GAGCACGCGG ACGCGCTCAC CGCAGGCTGG CGGTCACGCC GCCTCGCGGG CGAGAAGCAC
GAGATCGACG ACTTCCTCTT CACCTACTAC ACGACGCGTC CCGCCCAGCT GCGCCGCTGG
CACCCGGGAG CGGGCGTGGT GCTGCACGAC GCGCCCGGCG GCACCGAGGC CTTCGCGGAG
CGGGCGACGT GGCGCTGGTG CGAGCCCACG CCGGACGGCG GCCTCACGGT CGACGTCCCG
ACCTTCCTCG CGGACCGCGG GTCGACGGTC CGCTACGTGC GCACCCTCGT CGCGGCGACC
GCGGGGCGCC CTACGAACGT CGGGTGCTTC GGGCTGCACG AGTGGGCGAT GGTCTACCGC
CAGGGCGACG ACACCCGGCA CACGCTCCCG CTGCGCCTCG GTGCTGCCGG GACGGACGCC
GTCGTCGAGT CGCACCAGAT CCGGTGCACG CACTTCGACG CCTTCCGGTT CTTCACGCCC
GAGGCGGTCC CGCTCAACCG GCTGCAGCCC ACCCGTGACG ACCAGCCCGC CCTCGAGCAG
CCCGGCTGCC TGCACGCCGG CATGGACCTG TTCAAGTGGA CCAACAAGCT TGTCCCGGCC
CTGCCGAGCG ACCTCGTGCT CGACTGCTTC GAGCTCGCCC GCGACATCCG CCTGCTCGAC
ATGCAGGCCT CTCCCTACGA CGTCTCCCGC TTCGGTGAGG AGGCCGTGAT GATCGAGACC
CCCGAGGGCA AGGCGGAGTA CGCGCGGCGC CAGCGGGAGT TCGCCGAGCG CGGCGCACCC
CTGCGGCTGC GGATCGTCGA GGCCTGCGAC CGGCTGCTCG TCGGCTGA
 
Protein sequence
MLTQTALSHD TWAPLAAAHA EHADALTAGW RSRRLAGEKH EIDDFLFTYY TTRPAQLRRW 
HPGAGVVLHD APGGTEAFAE RATWRWCEPT PDGGLTVDVP TFLADRGSTV RYVRTLVAAT
AGRPTNVGCF GLHEWAMVYR QGDDTRHTLP LRLGAAGTDA VVESHQIRCT HFDAFRFFTP
EAVPLNRLQP TRDDQPALEQ PGCLHAGMDL FKWTNKLVPA LPSDLVLDCF ELARDIRLLD
MQASPYDVSR FGEEAVMIET PEGKAEYARR QREFAERGAP LRLRIVEACD RLLVG