Gene Sked_10720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_10720 
Symbol 
ID8632708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1250738 
End bp1251466 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_003313852 
Protein GI269794397 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.676593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCAC AGACGACCCG CCGCGAGATG CAGCGGATGG CCACCGAGCT CGAGATCAAG 
TCCGTCGCCC GCCGCCAGCT CGCCCAGGAC GGCGTCCAGG ACGTCACCCT GCGCGCGATC
GCCCGCGACA TGGGTATGAC GGCCCCCGCG CTCTACCGGT ACTTCCCGAG CCTCGACGAC
CTCGTCGCGT CGATGTGCGA GGACTTCTTC GAGGAGATCA CCGAGTCCAT CGGTGCCGCC
ATCGCGGCCG AGGGCGACGA CGGCGGGCGG GCGATGCACG CCGCCATCCG CACCTTCCGC
ACCTGGGCCG TCGAGCACCG CAACGAGTTC GCGCTCATGT TCCGCCACGA CACGGGGACC
CACGCCGACG GGGACAGCAC CTCACGCTTC GCAGCGGTCT TCTTCGACCT CTACCTGCGC
CTCTGGTCCG CACAGCCCTT CGAGGCACCG GAGCTCACCG ACACCTCGGC CGCCACCTGC
AGCGCGATCG GCCGGTTCGC AGCAGACTGC CTCGGGTCGC CGCTCTCGAG CGCCGACGCT
CCCCCTCCCG CCGCGCTCTT CGTCTTCGCG CGGACCTGGG TGCGGCTCTA CGGCGTCATC
GGCATGGAGG TCGTCGGGCA GCTCGCCTTC ATGTTCGACG ACGTCACGCC GTACTTCGAG
AGCGAGCTCG AGGACGCCGC GACGTCCCTC GGCATCCCCT ACGTCCCGCT CGAGCGCACC
ACCGCCTGA
 
Protein sequence
MTAQTTRREM QRMATELEIK SVARRQLAQD GVQDVTLRAI ARDMGMTAPA LYRYFPSLDD 
LVASMCEDFF EEITESIGAA IAAEGDDGGR AMHAAIRTFR TWAVEHRNEF ALMFRHDTGT
HADGDSTSRF AAVFFDLYLR LWSAQPFEAP ELTDTSAATC SAIGRFAADC LGSPLSSADA
PPPAALFVFA RTWVRLYGVI GMEVVGQLAF MFDDVTPYFE SELEDAATSL GIPYVPLERT
TA