| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_10500 |
|---|
| Symbol | |
|---|
| ID | 8632686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1223250 |
|---|
| End bp | 1224749 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | monosaccharide ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_003313833 |
|---|
| Protein GI | 269794378 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCTCC TGCAGATGCG CAGCATCGTC AAGCAGTTTC CCGGCGCCCG TGCACTCGAC
GGCGTCGATC TCGAGATCCT CCCCGGAGAG GTGCACTGCC TCCTCGGCCA GAACGGCGCC
GGCAAGTCCA CCCTCATCAA GGTGCTCGCC GGAGCCCACC AGCCCGACGA GGGCCAGGTC
CTCGTCCGCG GGGAGGTCGT CACCATCCCG CACCCCGTCG CCGCCCTCGG CCTCGGCATC
GCCACCATGT ACCAGGAGCT CGACGTCGTC GACGGCCTGA GCGTCACCGA GAACGTGTAC
CTCGGGCACG AGCTCGCCAC CGCGGGCTTC TCCCGCCGCC GGGCCGCCGT CCGCCGCACC
CGCGAGCTGC TCGCCCGTCT CGGGCACCCC GGCATCTCGC CCACCCAGGA CGTCGGCTCG
CTGTCCGCCG CAGGCAAGCA GATCGTCTCG ATGGCCCGGG CGCTCTCCCG CGACGCGAGC
GTCATCGTCA TGGACGAGCC CTCGGCGGTC CTCGACTCCG AAGAGGTCGA GAACCTGTTC
CGGGTGGTCC GCGAGCTCAC CGCCTCGGGC GTGGCGATCG TCTACATCTC GCACCGTCTC
GAGGAGATCC GCGCGATCGG CGACCGCATC ACCGTCCTCA AGGACGGCCG CACCGTCGCC
CAGAACCTCG CGGTCGCCGA CACCCCGACC CCCGAGCTCA TCCGGCTCAT GACGGGCCGC
ACCGTCGAGC AGGTCTTCCC GCCGAGCACC CCGCTCGCGG GGGACGCGGA GGTGCTCCTG
CGCGTCGAGG GGCTCGGGCT CGCCGGGACG TTCCAGGGCG TGTCCTTCGA GGTGCACGCC
GGCGAGGTCG TCGGCCTCGC CGGGCTCGTC GGCTCCGGAC GCTCGGAGAT CCTCGAGACC
GTCTACGGAG CCCGCCGCGC GACCGCCGGG ACCGTCCACG TCGCCGGACG ACGGACCCGC
CCCGGCTCCG TCGGCTCGGC CGTCGACGCC GGCGTCGGGC TCTGCCCCGA GGAGCGCAAG
AGCCAGGGGC TGCTCCTCGA CGAGCCCGTC TACCGCAACA TCACGCTCTC GACCTTCGGA
CGCTTCGCCC GCGGCAGCCT CCTGCACGAG GGCGACGAGC GGGCCGCCGC GGTGCGGGAG
GCCGACGCCC TCGACCTGCG GCCCCGCGAC GTCGAGCGCA CCGCCCGGAC GCTCTCGGGC
GGCAACCAGC AGAAGGTGCT GCTCGCCCGC TGGCTCGTGC ACGGCTGCCG CGTGCTGCTC
CTCGACGAGC CCACCCGTGG CGTCGACGTC GGCGCCCGCG CCGAGATCTA CGCCCTGGTC
CGCAGGCTCG CCGACGACGG CGCCGCCGTC GTCGTGGTCT CGAGCGAGAT CGACGAGGTC
CTCGGCATGT CCGACCGCGT CCTCGTGGTC TCCGAAGGAT CCGTCGTCTA CACCGGCCCC
GCCGACTCGA TCGACGAGCA CGGCGTGCTC GCCCTCGTCA TGGAAGGACG TGCCGCATGA
|
|---|
| Protein sequence | MPLLQMRSIV KQFPGARALD GVDLEILPGE VHCLLGQNGA GKSTLIKVLA GAHQPDEGQV
LVRGEVVTIP HPVAALGLGI ATMYQELDVV DGLSVTENVY LGHELATAGF SRRRAAVRRT
RELLARLGHP GISPTQDVGS LSAAGKQIVS MARALSRDAS VIVMDEPSAV LDSEEVENLF
RVVRELTASG VAIVYISHRL EEIRAIGDRI TVLKDGRTVA QNLAVADTPT PELIRLMTGR
TVEQVFPPST PLAGDAEVLL RVEGLGLAGT FQGVSFEVHA GEVVGLAGLV GSGRSEILET
VYGARRATAG TVHVAGRRTR PGSVGSAVDA GVGLCPEERK SQGLLLDEPV YRNITLSTFG
RFARGSLLHE GDERAAAVRE ADALDLRPRD VERTARTLSG GNQQKVLLAR WLVHGCRVLL
LDEPTRGVDV GARAEIYALV RRLADDGAAV VVVSSEIDEV LGMSDRVLVV SEGSVVYTGP
ADSIDEHGVL ALVMEGRAA
|
|---|
| |