| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_10480 |
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| Symbol | |
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| ID | 8632684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 1219283 |
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| End bp | 1221898 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_003313831 |
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| Protein GI | 269794376 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACGA AGAAGCCTTC AGGTCCCCCC GCCGGCACGT CCGAGACGGA CGAGCAGGCG
AGCCCGGGCA GCGCAGCGCC GAGCGGCAGC GCGAGCTCCG CGACCGAGGC CAGCGCCGAG
CTCAGCGCCG CCCGCACCCG GTGGGCCGAG CTCGCCGAGA CCATCGAGGC GCACCAGTTC
GCCTACTACG TCCGCGACGC CCCGACGGTC TCCGACGCGG AGTACGACAC GCTGCTCCGC
GAGCTCGGTG ACATCGAGGA GGCGCACCCG CAGCTGCGCA CCCCCGACTC GCCGACCCAG
CGGGTGGGCG GGACCTTCTC GACGGACTTC GCGGCGGTCG ACCACCGCGA GCAGATGCTC
AGCCTCGACA ACGCCTTCAA CGCCGAGGAC CTCGACGCGT GGGCCGAGCG CGTGCACCGT
GAGATCGGCA CCTCGCAGGT GCACTACCTG TGCGAGGTCA AGATCGACGG CCTCGCCATC
GCGCTGCTGT ACGAGAAGGG CCGCCTGGTC CGTGCCGCCA CGCGTGGCGA CGGGCGCACG
GGTGAGGACG TCACGCTCAA CGTCCTCACC ATCGAGGGGA TCCCGAAGGC GCTCGACGCG
TCGGTGAGAG AGGTGCCCGA CCTCATCGAG ATCCGCGGCG AGGTCTTCAT GCTCGTCGAC
CAGTTCGCCG CTCTCAACGA GGCGCAGGTC GCGGCCGGCA AGCCGCCCTT CGCCAACCCG
CGCAACGCGG CAGCAGGCTC GCTCCGCCAG AAGAACCCGA AGATCACCGC CGGCAGGCCG
CTGCGCATGT ACGCCCACGG GGTCGGTGCG CTGCACTGGG AGGCGGGGAC CCCGTCGGAG
CTGCGCCGCC AGTCCGACGC CTACGACTAC TTCCGGGCGT GGGGCGTGCC GGTCTCCGAC
CACAACCGTG TGGTCGAGGG CATGCCCGGC GTCCAGGAGA TGATCGACTA CTACGGCGAC
CACCGGCACG ACATCGAGCA CGAGCTCGAC GGCATCGTCG TCAAGGTCGA CGAGCTCGCG
CTCCAGCGTC AGCTCGGCGC CACCAGCCGG GCCCCGCGCT GGGCGATCGC CTACAAGTAC
CCGCCCGAGG AGGTCAACAC CACGCTCCTC GACATCCTCG TCAACGTGGG GCGCACCGGG
CGGGTGACAC CTTTCGGGAT GATGGAGCCC GTGCTGGTCG CCGGGTCGAC CGTCTCGATG
GCGACCCTGC ACAACGGCAG CGAGGTGCGC CGCAAGGGCG TGCTCATCGG CGACACCGTC
GTGCTGCGCA AGGCAGGCGA CGTCATCCCC GAGATCGTCG GCCCGGTGGT CGACCTGCGC
GACGGCTCCG AGCGCGAGTT CGTCATGCCG ACCGAGTGCC CGTCGTGCGG CACGACGCTC
GCCCCCGCCA AGGAGGGCGA CGTCGACATC CGCTGCCCCA ACCAGCGGTC CTGCCCGTCG
CAGCTGCGCG AACGCGTGTT CCACCTCGCG GGCCGCGGCG CCTTCGACAT CGAGGCGATG
GGCTGGGAGG CCGCGATCGC GCTCGTGGAC CCCGAGCACA ACCGGCCGGA GTCCGCGGAC
GCGGAGGGCG TCCCGGTCCA GGTCCCCGTC CTGGAGACAG AGGCCGGGTT CTTCGACTTC
GAGGTCGACG CGCTCGCGGA CGTCCTGGTC TGGCGCGAGA AGAAGAAGGC CGGCGTCGGA
ACCGGCGTGT GGGAGCAGGT CCCGTTCTTC TGGACCAAGG CGACCGCCAA GACGCCGTCC
AAGCCCTCGG CCACCACGGT CAAGTTCTTC GAGGAGCGCG AGAAGGCGAA GGCGCGTCCG
CTGTGGCGGG TGCTGGTCGC CCTCTCGATC CGCCACGTGG GCCCCACCGC GGCGCGCGCC
CTCGCGACGG CCTTCGAGTC GGTCGAGGCG ATCATGGCCG CGACCGAGGA GGAGCTCGCC
GCCACCGAGG GCGTCGGTCC GACCATCGCG CGTGCGGTCC GGATCTGGTT CAACGGGCGG
TCCTCGGTCG AGCCTGTGCC GGTGGCAGCC GCGCCGACTA CCGAGGCCGA CACCGACGAG
GCCGACACCG ACGAGGCCGA CACCGACGCG GTCCCCGGTG ACGGCGTCGA GCTGCCGGCC
GACGCCGTCC CCGGCGACGG AGCGCCTCCC GCGGACGCAC CGGACCCGGG CAAGGCCTCC
TCCGCGGACG AGGTCCACGA CGAGGACGAC GACGTCGAGA TCGACGGCTC CGACTGGCAC
CGCGAGATCA TCGACCGCTG GAGGGCCGCA GGCGTGCGGA TGCGTGACGA GCGCGACGAG
TCGATCGTCC GCACCCTCGA GGGGTTCACC GTCGTGGTGA CCGGATCCTT GGAAGGCTTC
AACCGGGACC AGGTCAAGGA GGCGATCATC GTCCGTGGTG GCAAGGCTGC CGGGTCCGTC
TCGAAGAAGA CCGACTTCGT GGTCGTCGGG GAGAACGCCG GGTCCAAGGA GGCCAAGGCG
CGCGAGCTCG GCCTCACTAT CCTCGACGAG GCCGGCTTCG TCACGCTCCT CGCCGAGGGA
CCGCCCGCGG CGGCAGAGCC GCTGCTGGAC GACGACGGGG AGCCGGTCGT CGACGGCGAG
CCGGCCGTCG GTGAGGTTGA GGCCCCGCTG AGCTGA
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| Protein sequence | MSTKKPSGPP AGTSETDEQA SPGSAAPSGS ASSATEASAE LSAARTRWAE LAETIEAHQF
AYYVRDAPTV SDAEYDTLLR ELGDIEEAHP QLRTPDSPTQ RVGGTFSTDF AAVDHREQML
SLDNAFNAED LDAWAERVHR EIGTSQVHYL CEVKIDGLAI ALLYEKGRLV RAATRGDGRT
GEDVTLNVLT IEGIPKALDA SVREVPDLIE IRGEVFMLVD QFAALNEAQV AAGKPPFANP
RNAAAGSLRQ KNPKITAGRP LRMYAHGVGA LHWEAGTPSE LRRQSDAYDY FRAWGVPVSD
HNRVVEGMPG VQEMIDYYGD HRHDIEHELD GIVVKVDELA LQRQLGATSR APRWAIAYKY
PPEEVNTTLL DILVNVGRTG RVTPFGMMEP VLVAGSTVSM ATLHNGSEVR RKGVLIGDTV
VLRKAGDVIP EIVGPVVDLR DGSEREFVMP TECPSCGTTL APAKEGDVDI RCPNQRSCPS
QLRERVFHLA GRGAFDIEAM GWEAAIALVD PEHNRPESAD AEGVPVQVPV LETEAGFFDF
EVDALADVLV WREKKKAGVG TGVWEQVPFF WTKATAKTPS KPSATTVKFF EEREKAKARP
LWRVLVALSI RHVGPTAARA LATAFESVEA IMAATEEELA ATEGVGPTIA RAVRIWFNGR
SSVEPVPVAA APTTEADTDE ADTDEADTDA VPGDGVELPA DAVPGDGAPP ADAPDPGKAS
SADEVHDEDD DVEIDGSDWH REIIDRWRAA GVRMRDERDE SIVRTLEGFT VVVTGSLEGF
NRDQVKEAII VRGGKAAGSV SKKTDFVVVG ENAGSKEAKA RELGLTILDE AGFVTLLAEG
PPAAAEPLLD DDGEPVVDGE PAVGEVEAPL S
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