Gene Sked_09330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_09330 
Symbol 
ID8632569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1073151 
End bp1074563 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003313717 
Protein GI269794262 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.828003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.646857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGCC CGCAGGACGG ACCGGAGGAG ACCCCCGTGC CCTTCGCGCC ACCCGGCGGC 
ACGCCGCCCG CACCGGGGCA GGACGGCTCC TCGGGGTCCC CTGACCCGGC AGACCCCGCA
GGCAAGGCAG ACCCGGCGCA GCAGGGCGCT CCCGCCCAGC AGCCCGGCGG CTGGGGCCAG
CCCTCGGCGC AGATCGGGTA CCAGCAGCCC CGGTACGGTC AGTACGCGCC CGGCGGCGGC
CCCGGTGCCC CCGTCCCGCC GGCAGGCTCG GGCGGCTACG GGGCCCAGCA GCCCGGTGGC
GCGCCGTACG GCGGTGCCCC GCAGTACGGG AGCCAGCAGT ACGGCGGCGC TCCCCAGTAC
GGCGGCGCCC CCCAGTACGG CGGCGCCCCC CAGTACGGCG GCCCGCCCCA GGGCGGTCCC
GCGTACGGCG GCCTCCCCGC CCCGGGCTGG CGTCCGGGAC CGGCCAAGCC GGGGATCATC
CCGCTGCGCC CGCTGTCCCT CGGCGAGATC TACGACGGCG CCTTCGCCGC GATCCGCAAG
AACCCGAAGG TCATGCTCGG CGTCGTGGCG CTGGTCATCG CCGTGGCCAC CATCGTCCCG
GCGCTCATCG CCTACGTGCT CGCGCCCTCG GCCAACCAGT GGCTCGACGA CGGCGTCGTC
ACCGTCTTCG ACGGGTCCGG CACCTCGCAG ACCTCGGCCG AGCTCGGCCT CGACGGGATC
GCCGGGCAGC TCTCGCAGGC GCTGCTCATC TCGCTCGGCG TGTACCTCGC GTCGATCATC
ACCACCGGCC TGCTCATCGT CGCGATCTCC CGGTCGGTCA TCGGCACCAG CTTCACGGTG
TCCGAGCTCT GGGCGCAGGT CCGCTCGAAG GTCGTCGGGC TCGTGGTCAT CTCCCTGCTG
CCCTCGGTCG GCATCGTCCT GGTCGCCGGC GCGTTCATCG GGATCATCGC GGCACTGGCC
GCGGGCGGCG CCGTCGAGGG CGTGCTCCTC GTGTCGGTCC TCGCCCTCGT CGCCGTGGTG
GTCGTCGCCG TCTGGCTGCT CACGCGGTTC CTGCTCACCC CCGCCGCCTA CGTGCTCGAG
GGGCAGAGCC TCGGCCGGTC GATCACCCGG GGCTGGCTCC TCAGCCGTGG GTCGTTCTGG
CGGCTCTTCG GCATCTACCT GCTCTCGTCG GTCCTCGCGT CGATCGTGTC GACCCTCGTC
GCGTCGCCGG GGTCCCTCGT GGCCGGCATC CTGTTCCCGT CGGGCGACAC CATGCACGCG
GGTGCCCTGG CCATCACGGT GGTCACGCAG ATCATCGCGT CGACCATCTC CACGACCTTC
CTGTCGAGCG TCGTCGCGCT CCTGTACATC GACGTGAGGA TGCGCCGCGA GGGCCTCGAC
GTGGAGCTCG CCGCGGCCGC CGACGAGGCC TGA
 
Protein sequence
MTSPQDGPEE TPVPFAPPGG TPPAPGQDGS SGSPDPADPA GKADPAQQGA PAQQPGGWGQ 
PSAQIGYQQP RYGQYAPGGG PGAPVPPAGS GGYGAQQPGG APYGGAPQYG SQQYGGAPQY
GGAPQYGGAP QYGGPPQGGP AYGGLPAPGW RPGPAKPGII PLRPLSLGEI YDGAFAAIRK
NPKVMLGVVA LVIAVATIVP ALIAYVLAPS ANQWLDDGVV TVFDGSGTSQ TSAELGLDGI
AGQLSQALLI SLGVYLASII TTGLLIVAIS RSVIGTSFTV SELWAQVRSK VVGLVVISLL
PSVGIVLVAG AFIGIIAALA AGGAVEGVLL VSVLALVAVV VVAVWLLTRF LLTPAAYVLE
GQSLGRSITR GWLLSRGSFW RLFGIYLLSS VLASIVSTLV ASPGSLVAGI LFPSGDTMHA
GALAITVVTQ IIASTISTTF LSSVVALLYI DVRMRREGLD VELAAAADEA