Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_08010 |
Symbol | |
ID | 8632437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 911319 |
End bp | 911987 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | predicted membrane protein |
Protein accession | YP_003313586 |
Protein GI | 269794131 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.733565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.146812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCG ACGGCACCCC GGAGACCACC ACTCCGATCG CGAGCCAGGG CTCCGGCTCT CCCGCCACGC CCTCCCAGGG ACTCCGCCGC ACGCGCCGGG CACCCTGGAG CCTCAAGGAG CTCATGCTCG TCGTGGTGCT CGGCGTCGTC TTCGGCTTCC TCTACTGGGC GCTCGTCCAG GGGTGGATCG CCTTCGCGGC GGTCACCGGC CCCTTCGGCG ACCTCACCCA GCACGTCCTG CTCGGCGGCT GGCTGATCGT CGCGCCCGTC GCGATCGCCA TCATCCAGCG CCCCGGTGCC GGCATCGTCG CCGAGGTGCT CGCCTCGGTC ATCGAGGTCG TGTTCCTCGG CTCGGCCGTC GGGCCCCTGC TGTTCGTCGC CGCCGCGATC CAGGGTGCCG GCAGCGAGCT GCCCTTCACC GCGACGCGGT ACCGCAGCTA CTCGTGGCTC ACCTACGCCG TGTCCGGAGG GCTCGGTGCC TTCGCGGTGT TCTTCTTCAG CGCGTTCCGT GCCGGCTGGT ACGGCACCGA CCTGTTCTGG ACCCGCCTGG CCATCCAGGT GGTCTCCGGT GTGGTCCTCG GCGGGCTGCT CGCCAAGGTG GTCGTCGACG CGCTCGCCCG CACCGGGGTC GTCGACAGCT TCGCCATCGG CCGCACGGCC CCGCGATGA
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Protein sequence | MSGDGTPETT TPIASQGSGS PATPSQGLRR TRRAPWSLKE LMLVVVLGVV FGFLYWALVQ GWIAFAAVTG PFGDLTQHVL LGGWLIVAPV AIAIIQRPGA GIVAEVLASV IEVVFLGSAV GPLLFVAAAI QGAGSELPFT ATRYRSYSWL TYAVSGGLGA FAVFFFSAFR AGWYGTDLFW TRLAIQVVSG VVLGGLLAKV VVDALARTGV VDSFAIGRTA PR
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