Gene Sked_08010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_08010 
Symbol 
ID8632437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp911319 
End bp911987 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content72% 
IMG OID 
Productpredicted membrane protein 
Protein accessionYP_003313586 
Protein GI269794131 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.733565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.146812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG ACGGCACCCC GGAGACCACC ACTCCGATCG CGAGCCAGGG CTCCGGCTCT 
CCCGCCACGC CCTCCCAGGG ACTCCGCCGC ACGCGCCGGG CACCCTGGAG CCTCAAGGAG
CTCATGCTCG TCGTGGTGCT CGGCGTCGTC TTCGGCTTCC TCTACTGGGC GCTCGTCCAG
GGGTGGATCG CCTTCGCGGC GGTCACCGGC CCCTTCGGCG ACCTCACCCA GCACGTCCTG
CTCGGCGGCT GGCTGATCGT CGCGCCCGTC GCGATCGCCA TCATCCAGCG CCCCGGTGCC
GGCATCGTCG CCGAGGTGCT CGCCTCGGTC ATCGAGGTCG TGTTCCTCGG CTCGGCCGTC
GGGCCCCTGC TGTTCGTCGC CGCCGCGATC CAGGGTGCCG GCAGCGAGCT GCCCTTCACC
GCGACGCGGT ACCGCAGCTA CTCGTGGCTC ACCTACGCCG TGTCCGGAGG GCTCGGTGCC
TTCGCGGTGT TCTTCTTCAG CGCGTTCCGT GCCGGCTGGT ACGGCACCGA CCTGTTCTGG
ACCCGCCTGG CCATCCAGGT GGTCTCCGGT GTGGTCCTCG GCGGGCTGCT CGCCAAGGTG
GTCGTCGACG CGCTCGCCCG CACCGGGGTC GTCGACAGCT TCGCCATCGG CCGCACGGCC
CCGCGATGA
 
Protein sequence
MSGDGTPETT TPIASQGSGS PATPSQGLRR TRRAPWSLKE LMLVVVLGVV FGFLYWALVQ 
GWIAFAAVTG PFGDLTQHVL LGGWLIVAPV AIAIIQRPGA GIVAEVLASV IEVVFLGSAV
GPLLFVAAAI QGAGSELPFT ATRYRSYSWL TYAVSGGLGA FAVFFFSAFR AGWYGTDLFW
TRLAIQVVSG VVLGGLLAKV VVDALARTGV VDSFAIGRTA PR