Gene Sked_07930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_07930 
Symbol 
ID8632430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp904221 
End bp904949 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content67% 
IMG OID 
ProductProtein of unknown function (DUF1526) 
Protein accessionYP_003313579 
Protein GI269794124 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.12147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.318525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCG AAGAGCAGGG GTCGTTCAGG ACTCAACCCC TTGATTTTAG GTTCCCGGAG 
AGGTCGATGA CAAGCCCCGA GCACGGCGCC TGGGTGACTG CGCCGCGGTT CCAGAAGTAC
GTCACCGCAG CCGGAGGCGA CCCAGGTCGG GCTCTGGCCC TCTACGACTG GAACGCTCAG
CTCGCGGCGG CGTGGCTGCG CGACGTCGGG CATCTCGAGG TCGGCCTCAG GAACGCCTAC
GATCGTGCGC TCTTGAGCCA CCCTGCCCTC GGCGGAGCAG ACTGGCTCCA CGCCTCACAG
CACGGTGTGC TCTTCCCTCC GCGACTGGAC CTTCGAGGGG TCGACGCGAA CGCCGGGATG
CGGGGGAAGA TCAGAGGCGC TCATCGGACG TGGCGGCACC AAGCAGCGCT TCCGCCCAGG
GGCAAGGTCC TCGCGGAGAT GCCCTTCTCG TTCTGGACGT CCCTCACCGC CCAGGAGCAC
GAAGCGACGA TCTGGACCCC AGTGCTCCAC CGGGCCCTCC ATGCCGGGAC TGATCGCACC
AAGGTCCACC CACGACTGGC AGAGATCCGG GAGCTTCGGA ACCGAGCCGC ACACATGGAG
TCGATCTTCA CCCGGGCTGG GGCCGTCTAC CCGCAGCTCA TCGGCGTGAC ACGTCGGCTC
GACAGGACGC TGGCGTCGTT CATCAGCCAG ACATCTCAGG TGCCCGATCT GCTGGCGGCC
AAGCCCTGA
 
Protein sequence
MLTEEQGSFR TQPLDFRFPE RSMTSPEHGA WVTAPRFQKY VTAAGGDPGR ALALYDWNAQ 
LAAAWLRDVG HLEVGLRNAY DRALLSHPAL GGADWLHASQ HGVLFPPRLD LRGVDANAGM
RGKIRGAHRT WRHQAALPPR GKVLAEMPFS FWTSLTAQEH EATIWTPVLH RALHAGTDRT
KVHPRLAEIR ELRNRAAHME SIFTRAGAVY PQLIGVTRRL DRTLASFISQ TSQVPDLLAA
KP