| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_07350 |
|---|
| Symbol | |
|---|
| ID | 8632372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 839619 |
|---|
| End bp | 841046 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | isochorismate synthase family protein |
|---|
| Protein accession | YP_003313525 |
|---|
| Protein GI | 269794070 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.120231 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCC AGTCGTCCGT GACGGACGTT GCCCCCGAAC CGCTGTCACC CCAGCTCGTG
GTCCGCACGA CGCTGCTCGG CACCGTCCTC GACGACGACC CCGCCGCGCT GCTCGCCCTC
CTCCCCCGCA CCGCGCCGCT CGCCTGGGTC CGCCGCGGGG ACGGGCTCGT CGCCTGGGGC
GAGGTCGCCC GCGTCGAGAC CACCGGGCCC GGACGCTTCG CCGACGCCGA GGCCGTCTGG
GCCTCCCTGC GATCGCGCGC CGTCGTGCGC GACGACGTCA AGGTCCCGGG CACCGGGCCG
GTCGCCTTCG GGTCCTTCGC CTTCGACGAC GGGTCGGACC AGCGCAGCGT GCTCGTGGTC
CCGCGCGTCG TGGTCGGCCG CCGCGGCTCG ACCGCGTGGA TCACCACCAT CACCACGACG
CAGACCTCCG CGGGCTCGGC TCCGACCCTC GCGCCGGTGC CGACGCTCGC GCACGTCCTC
GACGACGTCG ACCCTGTGAC CTCCCCCGGC GCGGTCACCT ACTCCCGCGG TGCCGTCGCC
GACGACGACT GGACGGCGTC GGTCGAGGAG GCCGTCCGCA GGATCCGCGA CGGACGCCTC
GACAAGGTGG TCATGGCGCG CGACGTCGAG GCCCGCACCG AGCACCCGAT CGACCCGCGC
TGGCTGCTCA CCCGCCTCGC GACCGCGTAC ACCGGGTGCT GGACCTTCAG CATCGACGGC
ATGGTGGGCG CGACCCCCGA GCTGCTCGTC CGCAGCGAGA AGGGGCTCGT CACGTCCCGC
GTGCTCGCCG GGACCATCCG GCGCACCGGG GGCGAGGAGG CCGACCTCGC GCGGGCCGCG
AAGCTCGCGC ACTCGTCCAA GGACCTCGAG GAGCACGAGT ACGCCGTCGC CTCGGTGGCC
GAGGCGCTCG CTCCCTACTG CCAGTCCCTC AACGTGCCCG AGACGCCCTT CGTGCTGCAC
CTGCCGAACG TGCTGCACCT GGCGAGCGAC GTCACGGGGG TGCTGTGCAC CTCGGGCACG
CCCGTGGCCG GGAACCTGAC CAGCACGACG AGCACGGCGT CGGCCGCCGC CCCGGTCGTC
GGCGGCCACG GCGTGGCTCC GTCGAGCCTC AGCCTCGCCG CCGCGCTGCA CCCGACGGCC
GCCGTGTGCG GCACGCCGAC CGCCGTCGCG AACGACCTCA TCCGTGAGCT CGAGGGCATG
GACCGCGCGC GCTACGCCGG CCCGGTGGGC TGGGTGGGCG GCGACGGCGA CGGCGAGTGG
GGCATCGCCC TGCGCTCGGC CTCCCTCGAC CCCGAGGACG ACCGTGCTGC CCGGCTGTTC
GCCGGCTGCG GCGTCGTCGC GGCGTCGGAC CCGGCGTCCG AGCTCGCCGA GACCGAGGCC
AAGCTCGAGC CCATGCGCCT CGCCCTCTCG ACCACCCCGC TGCCCTAG
|
|---|
| Protein sequence | MSTQSSVTDV APEPLSPQLV VRTTLLGTVL DDDPAALLAL LPRTAPLAWV RRGDGLVAWG
EVARVETTGP GRFADAEAVW ASLRSRAVVR DDVKVPGTGP VAFGSFAFDD GSDQRSVLVV
PRVVVGRRGS TAWITTITTT QTSAGSAPTL APVPTLAHVL DDVDPVTSPG AVTYSRGAVA
DDDWTASVEE AVRRIRDGRL DKVVMARDVE ARTEHPIDPR WLLTRLATAY TGCWTFSIDG
MVGATPELLV RSEKGLVTSR VLAGTIRRTG GEEADLARAA KLAHSSKDLE EHEYAVASVA
EALAPYCQSL NVPETPFVLH LPNVLHLASD VTGVLCTSGT PVAGNLTSTT STASAAAPVV
GGHGVAPSSL SLAAALHPTA AVCGTPTAVA NDLIRELEGM DRARYAGPVG WVGGDGDGEW
GIALRSASLD PEDDRAARLF AGCGVVAASD PASELAETEA KLEPMRLALS TTPLP
|
|---|
| |