Gene Sked_07150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_07150 
Symbol 
ID8632352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp819780 
End bp820958 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content75% 
IMG OID 
Productpredicted membrane protein 
Protein accessionYP_003313505 
Protein GI269794050 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.269027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCCCG ACGACCTCAC CGCCCGCATC AAGACCAGCC GCACCGGCCT CTTCACCGGT 
CGCGTGCTGC GCCTGTGGAC GCTGCACCCT CGGTGGTCCA TGGCCCTCAA GGCCTCGGTC
GCCGCCGCGA TCGCCTGGTA CGTCGGCGTC CTCGCCCCGG AGCCGCTCTC GGACTACCCC
TACTACGCGC CGCTCGGCGC CGTGATCGCG ACCTCCACGA CCGTGGCCCG GTCCCTGCGC
GAGACGAGCC AGACCGTCGC CGCGATCCTC CTCGGCGTCG TCGTCGCCCG GCTCGCCGAC
GCCTTCCTCC CCCCTGCCGC ACCGTCCATC GCCCTGGTGG TCGGGATCGC CACCGTCGCA
GCCGGCTGGA GGTTCTTCGG CGAGATGGGC GCGTACGTCA CCACGACGGC ACTGTTCGTC
CTCGTCATCG GCAGCGCCAA CCCCGAGGCC TTCGTCGGGG CGTACGCGGG CCTGGTCACC
GCGGGTGCCC TCGTCGGGAT CGCCGTCAAC CTCGCGTTCC CGCCCCTGCC GCTGACCCCG
TCGGACGCAG CGCTCGACGG CCTGCGCGAC ACCCTCGCCG ACCAGCTCGA CGCGCTCGCC
GACGGGCTGC GCGGCGACCG CCCCCCGACG CCGGGCGAGT GGGACGAACG CCGGTTCGCG
CTCGGCCCCG TCCTCGAGAA GTCACGCGCC GCCGTCGCGT ACGCGGCCGA GGCCAGCCGG
GGCAACTGGC ACGCGCGCCG CTACAGCGCG TGGTCCGTCG CGCAGGCCCA GCGGTCCAAG
ATGCTCGAGA GCCACGCCAC GCTCGTCGAC CACCTCACGG ACCTGCTCAC CGAGACCGAG
ACCCGCGACG TGCGAGACCC CGCGCTCGGC CCGGACCTGC GCCCGCCCGC CGCAGACGCC
CTCGCGGAGT ACGCGGAGGC GCTGCGGGCG CTCGAGGCCT CGACCGACGC GACCCTGCCC
GACCCGCCCA CGGCTCTCCG GGAGGCCGTC GACCGGCTGC GCCGCGAGGT GCGGGAGCAG
CGGTCTCGCC GAGAGGGCGA CCTCCTCGCC GCCGGCGCGC TCGTCCTCGC CCTCGACCGC
GCGGTGCGCG CCGTGAGCGT GGACGCCGAG TCCGAGGCTG CGGCCGAGAA GCAGAGCGAG
GCGACCGACG CGGACCGCAC GGGTGACGAG CAGGACTGA
 
Protein sequence
MPPDDLTARI KTSRTGLFTG RVLRLWTLHP RWSMALKASV AAAIAWYVGV LAPEPLSDYP 
YYAPLGAVIA TSTTVARSLR ETSQTVAAIL LGVVVARLAD AFLPPAAPSI ALVVGIATVA
AGWRFFGEMG AYVTTTALFV LVIGSANPEA FVGAYAGLVT AGALVGIAVN LAFPPLPLTP
SDAALDGLRD TLADQLDALA DGLRGDRPPT PGEWDERRFA LGPVLEKSRA AVAYAAEASR
GNWHARRYSA WSVAQAQRSK MLESHATLVD HLTDLLTETE TRDVRDPALG PDLRPPAADA
LAEYAEALRA LEASTDATLP DPPTALREAV DRLRREVREQ RSRREGDLLA AGALVLALDR
AVRAVSVDAE SEAAAEKQSE ATDADRTGDE QD