Gene Sked_06470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_06470 
Symbol 
ID8632284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp737614 
End bp738675 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content73% 
IMG OID 
ProductABC-type Fe3+-hydroxamate transport system, periplasmic component 
Protein accessionYP_003313441 
Protein GI269793986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGCGA CACCCCTGCA ACTCCCGTCC GCGCGCCTGC GCCGGGCCCT CGTCGCCGCC 
ACCACGGCGA CCGCCGTCCT CGCCCTCGCC GCCTGCGGCT CCGACGACTC GTCCGACGAG
GCCACCGGCA GCACGGCACC TGCGGCCGAG GCCGGTGCGT TCCCCGTGAC GATCTCCGGG
GCGCTCGGCG AGACCACCAT CGAGGAGGCG CCCGAGCGCG TCGTCACCCT CGGGTGGGGA
GCCTCGGACA TCGCGCTGTC CCTCGACGTG GTGCCCGTCG GCATCGAGAC GGACGCCTGG
GCCGGTGACG AGGACGGCTA CCAGCCGTGG TTCCGCGACG CCGTCGAGGC CCAGGGCGCC
GAGCTGCCGA CCACCATCGA GATGTACCCC GAGCTCGACG TCGAGGCCGT CATCGCGCTC
GAGCCCGACC TGATCCTCGC CCCGCAGTCC GGGCTGGACC AGGCGACCTT CGACCAGCTC
TCCGAGTTCA CGAACGTCGT CGCGTACCCC GAGGGCCCGT GGATCACGCC CCTCGACGAG
CAGGTCGAGA TCGCCGCGAC GGCGCTCGGC GTGCCCGACG CCGCGCAGCC GCTGCTCGAC
GAGATCGACA CCACCCTCGC CGACGCCGCC GCCGAGCACC CGGAGTTCGC GGGCAAGACC
ATCGCGTACG TCGCCTCGCA GGAGCTCGGC ACCCTCGCCG CCTACGTCCC CGGCGACCCC
CGCGTCGACA TGCTCACCGG CCTCGGCTTC GAGCTGGCCC CGTCCGTCGC CGACCTCACG
GCGCCCGAGG GCCTCTTCAC GGCCGACATC GGCCTCGAGA ACTCCGACGT GCTCTCCGAC
GCCGACGTCC TGTTCACCTG GTTCAACGAC GAGACCGAGC AGGCCGCGAC CGAGGCCCAG
CCGCTCTTCG CCTCGATCCC CGCCTTCGCC TCGGGCGCCT ACGTGCCGAT GGTCGACCGC
CAGCTCGGCA TGGCCGTGTC CGTCTCCACG CCGCTGAGCG TCCCGTGGGC CATCGACAAG
TACGTCCCGA TGATCACCGA GGCCGTCGCC CAGGTCGGGT GA
 
Protein sequence
MPATPLQLPS ARLRRALVAA TTATAVLALA ACGSDDSSDE ATGSTAPAAE AGAFPVTISG 
ALGETTIEEA PERVVTLGWG ASDIALSLDV VPVGIETDAW AGDEDGYQPW FRDAVEAQGA
ELPTTIEMYP ELDVEAVIAL EPDLILAPQS GLDQATFDQL SEFTNVVAYP EGPWITPLDE
QVEIAATALG VPDAAQPLLD EIDTTLADAA AEHPEFAGKT IAYVASQELG TLAAYVPGDP
RVDMLTGLGF ELAPSVADLT APEGLFTADI GLENSDVLSD ADVLFTWFND ETEQAATEAQ
PLFASIPAFA SGAYVPMVDR QLGMAVSVST PLSVPWAIDK YVPMITEAVA QVG