| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_06360 |
|---|
| Symbol | |
|---|
| ID | 8632273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 717777 |
|---|
| End bp | 719714 |
|---|
| Gene Length | 1938 bp |
|---|
| Protein Length | 645 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | glycogen debranching enzyme |
|---|
| Protein accession | YP_003313430 |
|---|
| Protein GI | 269793975 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATC CGACCACCGC TGTCGACGCG CCCCCCGTCT TGCCACGGCG CCAGCCGCTC
CTGCACGACC TCCTCCCGGC GCTCTGCGCG CCGACGCAGG CCTGGTCTGC TGCCGACGGG
CAGGTCCGCA GCCACGGCGG GCAGGGCTTC TACCACTCTG ACCTGCGCGT CCTCTCGCTC
GCGACCGTGC TCGTCGGCGG CGAGGAGCCC GAGACCGTCG CCGCCGGACC CGACGGCCCG
GGGGAGGTGC TGGTCACCGC GCTGCTGCGC GCCGTCGACG GCCCCGGCGC CGACCCGACC
GCCCGCCTCG ACCGGCGACG CACCGTCACG GCCGGGACCG TCACCGAGAC GCTCACCCTC
GGCTGCGCGA TGGCCGAGCC GGTCGAGGCG ACGGTCCGCC TCGAGCTCGG CTCCGACCTC
GCGACCATGG AGCAGGTGAA GAGCGGCAGC CCCACCCGCC TCCGCCCCGT CCGGGTGGAC
GGGGACGAGC TCGTCTGGTC CGACGGCCCG GTCACCGCAC GCGTCGCGGC CCCCGGTGGG
CTCGTCGACA CCACCGACCC GACCCGACCC ACGGTCACCT GGACCGTTCG CCTCCTGGCA
GGCTCTCCCG TCACGCTGAC CTGGACCGTG ACCGCCGTCG ACGACGAGGC CGTGGTCGCC
GGTGCGCCAG ACCGTGCCGA GCTGTGGTCC CGCCCGACGG CGGGGGCGAC CGCCGACGAC
CGTCTGACGC GGTGGGTCGA CCAGGCTCTC GACGACCTCG AGGGCCTGCA GATGGTGAGC
GCGCGCACCC CCGACGACGT GTTCCTCGCC GCGGGCGCGC CCTGGTTCTT CACGCTGTTC
GGCCGCGACT CGCTCATCGC GGCCCGCATG ATGCTGCCGC TCGGGACCCG GCTCGCCGCC
GGCACGCTGC GCACCCTCGC CGCCTACCAG GGGACGCGCG TCGACCGTGC GACCGCCGAG
CAGCCGGGCA AGATCCTGCA CGAGCTCCGG CGCGAAGAGC TCGCGATCGA GGGGGAGGGT
GTCGTCCTGC CGCCGGTGTA CTACGGCACC GTCGACGCGA CCCTGCTGTG GGTGTGCCTG
CTGCACGACG CCTGGCGCGC GGGGCTGCCG GACGAAGAGG TCGAGGCGCT CCTGCCCCAC
CTCGAGGCGG CGCTCGGCTG GCTCCGCGAG CACGCCGACG CCGACGGCGA CGGGTTCCTC
GAGTACGCCG ACGAGACTGG CCACGGCCTG GCCAACCAGG GCTGGAAGGA CTCCGGGGAC
TCGATCCAGT TCGCCGACGG GACGCTCGCG GTCGGGCCGA TCGCCCTCGC CGAGGTGCAG
GGTTACGCCT ACGAGGCCGC GGTGAGCGGC GCGGCGCTGC TCGACGCCTT CGGGCGCGAG
GGCGGCGACT CGTGGCGCAC GTGGGCCGCG GAGATGGCGG AGCGGTTCCG GGCGACCTTC
TGGCTGGAGG ACGCGCACGG CCGCTACCCG GGCATCGCTC TCGACGGGCA GAAGCGGGTC
GTCGACACGC TGACCAGCAA CGTCGGGCAC CTGCTCGGGA CGGGCATCCT CACGCCGGAG
GAGGCGGCGA CCGTGGCGGC CCGCCTGGTC GACCCGACCA TGAGCTCGGG CTTCGGCCTG
CGCACCATGG CCACGACCTC CGGCGGGTAC TGGCCGCTCA GCTACCACGG CGGTTCTGTG
TGGACCCACG ACACCGCGGT CGTGGTGGCC GGCCTGGTCC GCGAGGGCCT CGCCGACGAG
GCCGCCGTGC TGTCCGAGGG TCTGCTGCGC GCGGCCGCGG ACTTCGGGTA CCGGGTGCCC
GAGCTCCACT CGGGCGACGC CGCAGACGAC GTACCCGTGG CGGTCCCGTA CCCGGCCGCG
TGCCGGCCCC AGGCCTGGTC AGCGGCGTCG GCGGTGGTGG TCCTGGCGGC GTCAGGTGCG
CTCGGTCTCG AGGTCTAG
|
|---|
| Protein sequence | MSDPTTAVDA PPVLPRRQPL LHDLLPALCA PTQAWSAADG QVRSHGGQGF YHSDLRVLSL
ATVLVGGEEP ETVAAGPDGP GEVLVTALLR AVDGPGADPT ARLDRRRTVT AGTVTETLTL
GCAMAEPVEA TVRLELGSDL ATMEQVKSGS PTRLRPVRVD GDELVWSDGP VTARVAAPGG
LVDTTDPTRP TVTWTVRLLA GSPVTLTWTV TAVDDEAVVA GAPDRAELWS RPTAGATADD
RLTRWVDQAL DDLEGLQMVS ARTPDDVFLA AGAPWFFTLF GRDSLIAARM MLPLGTRLAA
GTLRTLAAYQ GTRVDRATAE QPGKILHELR REELAIEGEG VVLPPVYYGT VDATLLWVCL
LHDAWRAGLP DEEVEALLPH LEAALGWLRE HADADGDGFL EYADETGHGL ANQGWKDSGD
SIQFADGTLA VGPIALAEVQ GYAYEAAVSG AALLDAFGRE GGDSWRTWAA EMAERFRATF
WLEDAHGRYP GIALDGQKRV VDTLTSNVGH LLGTGILTPE EAATVAARLV DPTMSSGFGL
RTMATTSGGY WPLSYHGGSV WTHDTAVVVA GLVREGLADE AAVLSEGLLR AAADFGYRVP
ELHSGDAADD VPVAVPYPAA CRPQAWSAAS AVVVLAASGA LGLEV
|
|---|
| |