Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_05620 |
Symbol | |
ID | 8632199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 628275 |
End bp | 634433 |
Gene Length | 6159 bp |
Protein Length | 2052 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | fibronectin type III domain-containing protein |
Protein accession | YP_003313356 |
Protein GI | 269793901 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.691963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.30022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCTCG GGCGCGGCGC CACGCGCGCC GAGCGTGCAC GGTCCACCTC GGCCGTCGTC GCCGGCGTGA CCGTCCCGGC CGTGCTGGCG ATCATGGCCG TCATCGACCC GGGCGTGAAG ATCGCCGAGG TCGACCTCAA CGACGGCGCC GTGTGGGTCA CCAACCGCTC CGAGCTCAAG CTCGGCCGCT ACGACGCGAC CGTCAAGGAG CTCAACGGCG GGCTCGTGGC GACCGACCCG TCCTTCGACG TGCTGCAGTC CGGTCAGGAC GTCCTGCTCT CCGAGCCCCG GATGCTCTCG ACCGTCGACC CCGCGACCAT GGCGCTCTCC GCGCAGGCCG AGGTGCCCGC CGGCTCCACG GTGGCCATGG GTGCGGGTGT CGTCGCGATC ACCTCGCCCG AGGGTTCCGT GTGGATCCGC ACCATGACGA GCCTGGCCTC CGTCACGAGC GACACCCCCG GCGACCTCGA CCTCGGTGAC GGGGCGCTCG CGACCGTCGA CCCCGACGGC CTCGTGCTCG CCCTCGACCC GACCGACGGC ACCGTGCACC GGGGCGAGAT GGTCGACGGG ACCCTCGAGA TCACCGACGC CGGGACCCTC GACGACGCCG CGGGCGTGCT GCCCGACGCC GTCACCGCGG TCGACGGCCG GCTCGTCATG CTCGCGGGGA CCACACTGCA CGGCGACGGC TGGACCACCG AGGTGGTCGA CGGTGCCGCG CCCGTGCTCC AGCAGTCCTC GTCGCAGGGC CCGGCCCTCG CGGTCGCGAC CACCAGCCAC CTGCTCGAGG TCGACCTCGG CTCCGGGGAG GTCGAGGCGA CCCCCTCGAC CGGTCGCGGC ACGCCCGCAG CGCCCGTGCG CGTGGGCGAG TGCGTCTACG GTGCCTGGGC CAGCCCGACC GGCAGCTACC TCGTGCGCTG CGGCGACGGC GACCCGACGG TCCTCGACCT CGAGCGCATG ACCGCGCAGA GCACGCCGGT GTTCCGCGTC AACCGCGCGG TCGTCGCCCT CAACGACACC CTGCAGGGCA ACATGTGGCT GCCCGACGAG ATGCCGCGCG TCCAGGTGCC CAACTGGGAC CAGATCGAGC AGGACGACGA CACCACGGAC ACCGAGGAGG AGTCCGACGA GGTCGAGTCC ACCCAGCAGC AGCTCACCGA GTGCACCGCG CAGTCGGCCG CACCGGGTGC CGTCGACGAC GACCTCGCCG TCCGCCCCGG GCGCTCGACC GTCCTCGAGG TCCTCAACAA CGACACCGCC GGCGAGTGCG GCATCATCGC GATCAGCGAG CTCGACACGA GCGGCCTCGA CGAGGGCTTC GCGGTGGTCG AGCCCGTGTT CGGCGGGCGC GCGCTCCAGG CCGTCGTGTC CCCGCAGGCC CAGGGCAGCG CGCAGCTGAC CTACACGATC TCCGACGGCC GCGGCAACAG CCCGCCCTCG ACAGCCACCG TGACGCTCAC CGCCGCCGAC CCCGGGAGCA ACTCGGCGCC GCTCGAGCTG CGCACCGGGT CGGTCGAGCT CGAGCAGGGC GCGACCGTGG ACCACGACGT CCTCGCCGGG TGGGTCGACC CCGACGGTGA CGAGCTCGTG CTCCTCGGCG CGGTCACCGA CGGGACCGCG ACGGTCCGCG CGCGCCAGAA CGGCATGCTC ACCGTCACCG CCGAGGGCGA GGCCCTCGGC CGCCAGACCG TCACCGTCGT GGTGAGCGAC GGCATCGAGC AGACCACCGG GCAGGTGACC GTCGACGTCC GCGCGACCGG CTCGCTGGCG CCCCGCATCG ACCCGATCCA CGTGGTCACC GAGGCCGGCA AGGACGTCGA GGTCGACGTC CTCGAGTCGG TCCACAGCCT CTCCCGCGAG CCCGTGCGCC TCGCGAGCGT CGACGAGCCG CCCGGCACCA CCGTCGAGGC CACCCTCGAC GACGGCACCT TCACCTTCAC CGCGACCAAC GCCGCCACGT ACTACGTGCC GTTCTCCGTG GTCGCCTCGC CCCAGCAGGC GCAGGGCCTC GTCCGTGTCG ACGTCGTCGA GCCGACCACC GAGCCGCAGC GCCCGGTCGC CGTGCGCGAC CTCGCGCCGC TGCCCCGCGG CGGCGAGGTG ATCGTCGACC CGCTCGCCAA CGACGTCGAC CCCGCCGGCG GCGTCCTCGT GGTGACCTCC GTCGCCGCGG TCGACGGCTC CGCGCTGCAG GCCGTGGTGG TCGACCACCG GTACGTCCGC ATCAGCTCCC AGCGCGACCT CGCCGCCCCC GAGACCCTCG AGTACCGCGT GTCGAACGGC CTCGAGGAGG TCTCCGGCGA GATCCTCGTG CAGCCCGTCG AGCCCACGGG CGAGGACCGC CCGCCGGTCC TCCAGGACCT CGAGGCGTCG GTGCGCACCA CGGGCGTCGT GACGATCCCC GTGCTCGACA GCGCCGTCGA CCCCGACGGC GACGTGATGT CGGTCGTCCC CGACCTGCTC GAAGACCTCA GCCCCGAGCA GGGCCTGCTG TTCGCCTCGG GCGACGTGCT GCGCTTCCAG GCGACCGGCA CCCCGGGCAT CGTGGAGACG ACGTACAGCG TCCAGGACAC CGGCGGGAAC GTCACGACCG CCCGGCTGAC CATCTCGGTG CACGCCTCGG ACCCCGAGAC CAAGACCGCC CCGCGGCCCC GCGCGCTCAC CGCGCGCACC TTCGACGGCG AGACCGTCCG CATCCCCGTG CCGCTCACCG GCATCGACGA CGACGGCGAC GGCGTCACCC TCCTCGGCCA GGGCGACAGC GTGCCCACCC TCGGGCGCAT CGTCGCCGTG GGGGCCGACT ACCTCGAGTA CGAGGCCTTC CCCGGGTCCT CCGGCACCGA CTCGTTCCAG TACGCCGTCG AGGACTGGAC GGGGCAGCGC GCCCAGGCGA CCGTCCGCGT CGGGATCTCC GCTCGCAGCG CGCAGGGACA GGCCATCGTC GCCCGCAACG ACGAGGCGAC GGTCCGGCCC GGCCAGCGCG TCGAGGTCCG CGTGCTGCGC AACGACGTCG ACCCCTCGGG CGGCGAGCTC ACCCTCGCCC CCGAGCTCGA GGTGCCCGAG GGCATCGAGG CGCACGTCGA CAAGCGCCGT GTCGTGGTCA CCGCGCCTGA CCAGGCCACC GAGCCGCTCT CCATCGTCTA CACCGTGACC AACGAGCTCG GTGCCACGGC CCGCGCGACC CTGACCGTCT ACGTCGTCGA CGACGCGCCC ATCGCCCCGC CGATCGCCCG CGACGTCACG GTGGCCCCGA TCGAGGTGGT CGACAAGACG AGCGTCGAGG TCGACGTGCT CGCCCTCGCC GAGAACCCCT CCGGGCCGCT GAGCGACCTC GAGGTGCGGG TGCCGTCGTC GCACTCGGAC GTCGCCCAGG TGGTCGCCGG CGACCGCGTG CTGGTCACCC TCACCGACCG CACCCAGAAC ATCCCCTACC GCCTGGTCAA CACCCGGCCC GAGGCCGACG GCGCCGGCGC GTACGCCTTC ATCACCGTGC CCGCCCTCGG CGACTTCCCG CCCACGCTGC GCCCCAAGAC GCGCGAGCTG CGCGTGGCCT CCGGCGAGGA GCTCGAGATC TCCCTCGCCG AGTTCGTCCA GGTCGGCACC GGCAAGACCG CGCGCGTCCG CGACGCCGAG CGGGTCTCGG CGACGAACTC CGACCAGAGC GACCTCGTGG TCGACGACAC CACCCTCCGG TTCGTCTCGG CCCCCGGCTA CGCGGGCCCC GCCTCGATCA CGGTCGAGGT CACCGACGGT GCCACCCGCG ACGACCAGGG CGCACGCCGC TCGACGCTCA CGCTGCCCAT CACCGTGTTC ACCGAGGACG CCCGCCCGCC GACCTTCACG CCGAGCGAGC TCCTCGTGCC GCAGGGCGAG TCCACGAGCG TCGACCTGCT CGGGTTCACC CGTGGGCCCC AGGGAGCGTC GGCCGAGCAG AAGTACACCT ACGAGGTGGT CCAGGCGCCC GGCAACGGGT TCCTCGCCTC GATCACCCCG GGCACCACGC GCCTCGCCGT GAGCGTCCCC GCCGACGTCG CCCGCGGCAC CCTCGGCAGC GCGACCGTGC GCCTCGGCTA CGGGACCGAG GGGACCATGG ACGTCCAGGT CACCTTCAAG GTCGCCGCGA GCTCGCGCCA GCTCGCCTCG CTCATGGTCC ACGAGGCCGA GGGCGCCGCC GGTCGGGACA CCACGATCAA CGCGCTGGCC GGGGCAGGCA ACCCCTTCAG CGAGCCGCTC ACGCTGCTCA GCGCCTCGCC GGTCGTCGCC GCGCAGGGCA CCGCGCGCGT CTCCGGCAGC AACGTGGTGA TCCGGCCCGC CGAGGGCTTC ACCGGGCAGA TGGTCGTGCG GTACCGGGTC CGCGACGTCA CCGGCGACCC GCTGCGCGAG GTCGACGGCA CCATCCGCGT CGCCGTCCGC GACGTGCCCG GCGCACCGTC GCCCCCCCGG GTCGGGGCCG TGACCAGCCG CGCCGTGCCG CTCGCCTGGG ACGCGCCCAC CACCAACGGC TCGCCCATCA CCGGCTACCG GGTGACCCGG TCGCCCGGTG GCCAGACGAC GTCCTGCCCC ACCACCACCT GCACCGTGAC CGGCCTGAAC AACGGGACGG AGTACACCTT CACCGTCGCG GCCGAGAACG CCCTCGGCTG GGGCCCCGAG TCGACCGCGA GCGTCCGGGC CACCCCGGAC GCCGTCCCCG GCATCCCTGG CGCCCCGAGC CTCGAGGCCG GCGACCGCAC GGTCACCGCC ACCTGGAGCG CCCCCGCGAA CGACGGGACG CCCGTCACCA AGTACACGGC CGAGCTCTCC GGACCCGGCG GCATCGTGTC CCGCGAGATC GCCGGGACCA CCATCGTGTT CTCCGGCCTC GAGAACGGCT CCGGCTACAC CGTCCGCGTC CGCGCCCACA ACGCCGCCAC CCCGCCCGAG GGCGGGGCCT GGAGCGACGG GTCGCGCGCC GCCGTGCCCG CCGGCCTGCC AGGGACCCCC GAGGTCAGCG CGGCACGGGT GGACACGGTG CTCGGCGGGC AGATCCGCGC CGCCTGGACC GCCGCCGGCT CGAACGGCGC CGAGGTCACC GGGTACAGCG TGGTCGCGCA GAGCCCGGGG CACCCGACGC TCACCGCGTC GGTCGGCGGC GGAGACCGCG AGACGCTGTT CACCTCCGTG GTCAACGGCG CGGAGTACAC GGTGTCCGTC ACCGCCCGGA ACTCGGTGGG CGAGGGGGCG CCGGGCGTCA GCGCGCCGAC CTCGACCTTC GCGCCGCCCA AGGCGCCGAC CGGGGCGCGC GCTGCGGCTG CCTCGGGCCG GCCCTTCGGC GACGGCCAGG TCACGCTCTC GTGGAACGCC CCGACCGACA CCGGTGGAGT GGGCATCCGC GTCGCGCGCT ACGAGCTCGA GGGCCCTGGC GGCATAGAGA GCCTCGTCGA GACCAGCAAG ACCGTCTCGC CGATCGCCGG CGGGACGCAG TCCGCCCAGT TCCGGGTCCG CGCGATCAAC GACCGTGAGG CCGTGGGCGA GTGGACGACG ATCGCGCCGG TCGACGTGCG GACCGTGCCG CAGAAGCCGG TCGTCACGAT CACCCCCAAC GGGTTCCGCA GCGTCAACGC GTCGTGGGTC GTCGAGAACA ACGGTGGGTC GTCGGTGACC GGGTACAAGG TCTGGGTGAA CGGCGCGGAG TCCTCGACGG CTGGGACCTC GATGTCGATC GACGTGCCGC TCGACGGTCT CGTCACGGTC CAGGTCGTCG CCGTCAACGC CCAGGGCGAC AGCCTGCCGG AGAGCAAGCA GGGCGGCCCC GCGGCATCGC AGCCGCCGAC CGCCCCGGCC GCGGTGACCG CGACGCCGAT GGACGCGCCA CCGTCGATCA CGATGAACTG GAGCCCGGCG AGCGAGAACG GAAGCCCGAT CACTGGGTAT GAGTACCGAC TGACGCGCCC GAACGGCACC GTCTCACGCT GGTACCAGGC TTCCGGTGGC CCCTCGGCCA CGACCGCGAC GGCCACTGCG GCGGAGCAGG GTGTCGGACC GGGGATCTGG CGCGTCGAGG TGTCCGCGGT CAGCCCGAAG GGTCGGACGA CGGCCCCGCC GATCGAGGTG ACGATCGCTG AGCCACCCAC GCCTGAGCCC GAGCCCACCG ACCCGGGCAC GGACCCCGGC ACGGGGTGA
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Protein sequence | MRLGRGATRA ERARSTSAVV AGVTVPAVLA IMAVIDPGVK IAEVDLNDGA VWVTNRSELK LGRYDATVKE LNGGLVATDP SFDVLQSGQD VLLSEPRMLS TVDPATMALS AQAEVPAGST VAMGAGVVAI TSPEGSVWIR TMTSLASVTS DTPGDLDLGD GALATVDPDG LVLALDPTDG TVHRGEMVDG TLEITDAGTL DDAAGVLPDA VTAVDGRLVM LAGTTLHGDG WTTEVVDGAA PVLQQSSSQG PALAVATTSH LLEVDLGSGE VEATPSTGRG TPAAPVRVGE CVYGAWASPT GSYLVRCGDG DPTVLDLERM TAQSTPVFRV NRAVVALNDT LQGNMWLPDE MPRVQVPNWD QIEQDDDTTD TEEESDEVES TQQQLTECTA QSAAPGAVDD DLAVRPGRST VLEVLNNDTA GECGIIAISE LDTSGLDEGF AVVEPVFGGR ALQAVVSPQA QGSAQLTYTI SDGRGNSPPS TATVTLTAAD PGSNSAPLEL RTGSVELEQG ATVDHDVLAG WVDPDGDELV LLGAVTDGTA TVRARQNGML TVTAEGEALG RQTVTVVVSD GIEQTTGQVT VDVRATGSLA PRIDPIHVVT EAGKDVEVDV LESVHSLSRE PVRLASVDEP PGTTVEATLD DGTFTFTATN AATYYVPFSV VASPQQAQGL VRVDVVEPTT EPQRPVAVRD LAPLPRGGEV IVDPLANDVD PAGGVLVVTS VAAVDGSALQ AVVVDHRYVR ISSQRDLAAP ETLEYRVSNG LEEVSGEILV QPVEPTGEDR PPVLQDLEAS VRTTGVVTIP VLDSAVDPDG DVMSVVPDLL EDLSPEQGLL FASGDVLRFQ ATGTPGIVET TYSVQDTGGN VTTARLTISV HASDPETKTA PRPRALTART FDGETVRIPV PLTGIDDDGD GVTLLGQGDS VPTLGRIVAV GADYLEYEAF PGSSGTDSFQ YAVEDWTGQR AQATVRVGIS ARSAQGQAIV ARNDEATVRP GQRVEVRVLR NDVDPSGGEL TLAPELEVPE GIEAHVDKRR VVVTAPDQAT EPLSIVYTVT NELGATARAT LTVYVVDDAP IAPPIARDVT VAPIEVVDKT SVEVDVLALA ENPSGPLSDL EVRVPSSHSD VAQVVAGDRV LVTLTDRTQN IPYRLVNTRP EADGAGAYAF ITVPALGDFP PTLRPKTREL RVASGEELEI SLAEFVQVGT GKTARVRDAE RVSATNSDQS DLVVDDTTLR FVSAPGYAGP ASITVEVTDG ATRDDQGARR STLTLPITVF TEDARPPTFT PSELLVPQGE STSVDLLGFT RGPQGASAEQ KYTYEVVQAP GNGFLASITP GTTRLAVSVP ADVARGTLGS ATVRLGYGTE GTMDVQVTFK VAASSRQLAS LMVHEAEGAA GRDTTINALA GAGNPFSEPL TLLSASPVVA AQGTARVSGS NVVIRPAEGF TGQMVVRYRV RDVTGDPLRE VDGTIRVAVR DVPGAPSPPR VGAVTSRAVP LAWDAPTTNG SPITGYRVTR SPGGQTTSCP TTTCTVTGLN NGTEYTFTVA AENALGWGPE STASVRATPD AVPGIPGAPS LEAGDRTVTA TWSAPANDGT PVTKYTAELS GPGGIVSREI AGTTIVFSGL ENGSGYTVRV RAHNAATPPE GGAWSDGSRA AVPAGLPGTP EVSAARVDTV LGGQIRAAWT AAGSNGAEVT GYSVVAQSPG HPTLTASVGG GDRETLFTSV VNGAEYTVSV TARNSVGEGA PGVSAPTSTF APPKAPTGAR AAAASGRPFG DGQVTLSWNA PTDTGGVGIR VARYELEGPG GIESLVETSK TVSPIAGGTQ SAQFRVRAIN DREAVGEWTT IAPVDVRTVP QKPVVTITPN GFRSVNASWV VENNGGSSVT GYKVWVNGAE SSTAGTSMSI DVPLDGLVTV QVVAVNAQGD SLPESKQGGP AASQPPTAPA AVTATPMDAP PSITMNWSPA SENGSPITGY EYRLTRPNGT VSRWYQASGG PSATTATATA AEQGVGPGIW RVEVSAVSPK GRTTAPPIEV TIAEPPTPEP EPTDPGTDPG TG
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