Gene Sked_05610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_05610 
Symbol 
ID8632198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp626197 
End bp628278 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content75% 
IMG OID 
Productserine/threonine protein kinase 
Protein accessionYP_003313355 
Protein GI269793900 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.850356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.365615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCC GCCGTCAGCC CTCGATCCCG CCCAAGATCC CGGGCTACGA GTTCGTGCGG 
CTGCTCGGCA TGGGTGGTTT CGCCGACGTG TTCGAGTACC GCCAGGAACT GCCGCGTCGG
TCCGTCGCCG TCAAGGTGCT GCTGTCGGGG TCGCTCGACC AGGAGGCCCG CGAGGCCTTC
TTCGCCGAGG CCAACGTCAT GGCCCAGCTG TCGCACCACC CGTCGATCGT CACGGTCTAC
CACGCCGACA TCGCCTCGGA CGGGCGTCCG TACCTCGTCA TGGAGTACTG CTCCCGCCCC
GGGCTCGGCA CGCGCTACCG CATGGAGCGG TTCACGGTCG CCGAGGTGCT GCGCACCGGC
ATCCGCGTGG CATCGGCCGT CGAGGCGGCG CACCACCTGG GGATCCTGCA CCGCGACATC
AAGCCCGCGA ACATCCTCGC GACCGACTTC GGCTGGCCCG CGCTCACCGA CTTCGGCATC
GCCTCGACCC TCGGGTCGTC GGCCGCCGCC ACCGGCATGT CGATCCCGTG GGCCGCCCCC
GAGCTGCTCG CCGAGCGGCC GACGGGCGAC GCCCGCGGCG ACGTCTACTC CCTCGGCGCG
ACCATCTACT CCCTGCTCGT CGGGCGCTCG CCCTTCGAGG TGACCGGTCG CAGCAACAGC
CCGGCCGACC TGCTCTCGCG CATCGAGCGT GCACCGCTGC CCACCATCGA CCGCGAGGAC
GTGCCGCCGG GCCTGTCGGC CGTGCTGGCG CGCGCCATGG CCAAGGACCC GGACCGGCGG
TTCCTCAGCG CGCTCGCCCT CGCGCACGCG CTCCAGCAGG TCGAGCGCTC GATGCACCTG
CCCGTCACCA GCATCGACCT GTCGCAGGAC ATCCTCCCCG AGGCCCCCTC CTCCCGCGGC
GACGCCGACG GCTCGTCGGG CGACGGCTCG CGCGACGACC AGGTGACCCG CCTGCGCCCC
GTGGTGAGCA TCGACCCGCA CGGCGGCCCC TCCGACCTCT CGCAGGGCTT CGCCGCACCC
GCGGCTTCAC CGGCCACCCG TGCGCAGGCC CGGGCCGCCC GCCGCCCGCA GGCGCCGCCG
CCCCCGCTCC CCGGGACCGG GCAGGGAGCG TCGAGCTCCC GCGACGTCGA CGAGGACGCG
ACCCGGCTGC GACCCATCAC GACCATCACC GCCCAGACGT CCGTCCCCGA CCAGCGCCAG
CGCTCGTGGG GGACGACGGG CGGCGACGTC CCGACCGGCA CCACCGGTGG CGTCCCGACG
GGAACCACCG GTCGCGGACC GGCACGGGCT GCCGCGGTGC CCCCGCCGCC CGCGCCGGAG
GGGACGAACC CCGCACAGGG CTATGCCGGT GCGCAGTCCT ACCCTGAGCC GCAGCCCTAC
CCCGTGCCGC AGGCCTACCC TGCGCCGCAG CCCTACCCGC AGACGCTCGC CTGGCAGCAG
CAGGGCCATC CGGCACAGGC CGGCCCTGTC GAGCAGACGG GCTACGTGCC GCAGCCCGGG
CCGTCGGGGT ACCCGTCGCC CGGGCACCCG GCGCAGCACG GCGCAGGCCA CAGCCCGGAG
GCGCCGTTCG CGCCGTCGGC GACGGCCTTC TCGCCCACGC CCGCCGAGAT CCGTTCCCAG
CACTACCGCA AGCCCTCGTC CGACGACGAG ACCGGCCACC GCGGACCGCG GCGCGGGTGG
GTCGTGGGTG CCGCGGCCGC CGTCGTCGTC GCCGCGCTGG TCACCGTCGG CGTGCTCACC
CTCGGTCGCG ACGCCGACCC GGACCCGCAG GCCACCGACG CCCCGCTGCC CACCCCGACC
GCGGTCGAGG AGGCCACCGT CCCGGCGCCG GCCAAGCTCA CCGGCATCGA CCAGGGCGAC
GGCACCGCGG AGTTCACCTG GGAGAACCCG GACGAGCAGG AGGGCGACAC CTACGTCTGG
CGCGAGGTCA CCGTCGGCTC TCAGGGGGAG GCTCGCCGCA CCACCTCGAG CGAGGTCGTC
GTCCCCCTCG ACGACAGCAC CGGGGTCGTC TGCATCGAGG TGTCGATCGT CCGTGACGAC
GGTCGCGCCT CGACCATGCC CGTCCAGGAG TGCAGCCGAT GA
 
Protein sequence
MSARRQPSIP PKIPGYEFVR LLGMGGFADV FEYRQELPRR SVAVKVLLSG SLDQEAREAF 
FAEANVMAQL SHHPSIVTVY HADIASDGRP YLVMEYCSRP GLGTRYRMER FTVAEVLRTG
IRVASAVEAA HHLGILHRDI KPANILATDF GWPALTDFGI ASTLGSSAAA TGMSIPWAAP
ELLAERPTGD ARGDVYSLGA TIYSLLVGRS PFEVTGRSNS PADLLSRIER APLPTIDRED
VPPGLSAVLA RAMAKDPDRR FLSALALAHA LQQVERSMHL PVTSIDLSQD ILPEAPSSRG
DADGSSGDGS RDDQVTRLRP VVSIDPHGGP SDLSQGFAAP AASPATRAQA RAARRPQAPP
PPLPGTGQGA SSSRDVDEDA TRLRPITTIT AQTSVPDQRQ RSWGTTGGDV PTGTTGGVPT
GTTGRGPARA AAVPPPPAPE GTNPAQGYAG AQSYPEPQPY PVPQAYPAPQ PYPQTLAWQQ
QGHPAQAGPV EQTGYVPQPG PSGYPSPGHP AQHGAGHSPE APFAPSATAF SPTPAEIRSQ
HYRKPSSDDE TGHRGPRRGW VVGAAAAVVV AALVTVGVLT LGRDADPDPQ ATDAPLPTPT
AVEEATVPAP AKLTGIDQGD GTAEFTWENP DEQEGDTYVW REVTVGSQGE ARRTTSSEVV
VPLDDSTGVV CIEVSIVRDD GRASTMPVQE CSR