Gene Sked_05560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_05560 
Symbol 
ID8632193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp618793 
End bp619785 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content73% 
IMG OID 
Productacetyl esterase (deacetylase) 
Protein accessionYP_003313350 
Protein GI269793895 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.590468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAGT TCGACCTGCC GCTCGACCAG CTCGTCACCT ACCTGCCGGA CCGCGAGGAG 
CCGGCGGACT TCGACGACTT CTGGCGCCGC ACCCTCGACG AGCAGGACGC CGAGCACCCC
CTCGAGGCGA CCTTCGAGCA GGTCGACACG GGTCTGACCG AGATCGTCAC GGAGGACGTG
ACCTTCATCG GCTTCGGCGG TCAGCCCGTC AAGGCGTGGC TGCACCGCCC CGCCCGCGCG
ACCGGTCCGC TGCCGACCGT CGTCACCTAC ATCGGGTACG GGGGAGGGCG CGGGCTGCGC
CACGAGCACG TGCTGCACGC CGCCGCGGGC CGCGCGCACC TCGTCATGGA CAACCGCGGC
CAGGGCAGCG GCCACCAGAT CGGCGACACG GGGGACTCCG GGCAGACCGG CGCCCACGCC
GCCGGGTTCC TCACCTCGGG GATCGACTCG CCCGAGACGT ACTTCTACCG CCGCATCTTC
ACCGACGCCG AGCGGGCCGT GCGGGTCGCC CGCGGGCACG ACGCCGTCGA CACCTCGGCC
GTCATGGTGT CGGGCGGGTC GCAGGGCGGC GCGCTGTGCC TGGCTGCCGC GGCCCTCACC
GAGCTGCGCG ACGGCCTCGG GGAGCCTGCG CTGCGGGCGG CGATCGTCGA CGTGCCCTTC
CTGGCGCACG TCCGACGGGC GTCGGTGGTC ACGGGTGCCC GGCCCTACGG CGAGCTCGTC
GAGTACCTGC ACACGCACCG TGACCGCGTG GAGCAGGCCT TCCGCACGCT GAGCTACGTC
GACGGCGTCA ACCTCGCGGC GCGCATCACG GTGCCGGGGC TGTTCTCCGT CGGGCTCATG
GACGAGGTCT GCCCGCCGTC GACGGTCTAC GCGACCTACA ACCACTACGC GGGCCCCAAG
GAGATGGTCG TCTACCCCTA CAACGGCCAC GAGAACGGCG GCCCGTTCCA GGAGGCCGAG
CACCTGCGCT TCGCCCGCGA GCACGTGGGC TGA
 
Protein sequence
MPQFDLPLDQ LVTYLPDREE PADFDDFWRR TLDEQDAEHP LEATFEQVDT GLTEIVTEDV 
TFIGFGGQPV KAWLHRPARA TGPLPTVVTY IGYGGGRGLR HEHVLHAAAG RAHLVMDNRG
QGSGHQIGDT GDSGQTGAHA AGFLTSGIDS PETYFYRRIF TDAERAVRVA RGHDAVDTSA
VMVSGGSQGG ALCLAAAALT ELRDGLGEPA LRAAIVDVPF LAHVRRASVV TGARPYGELV
EYLHTHRDRV EQAFRTLSYV DGVNLAARIT VPGLFSVGLM DEVCPPSTVY ATYNHYAGPK
EMVVYPYNGH ENGGPFQEAE HLRFAREHVG