Gene Sked_05220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_05220 
Symbol 
ID8632159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp575322 
End bp576263 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content76% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003313316 
Protein GI269793861 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.900429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGC CCGACAGCCC CACCCCCTCC CCGAGCAGCG CCACCTGGCA GCCGGACGGC 
CAGCACGGCG CGCGCCTCGT CCGGGACCAC ACCGTCCTCG CCGAGTACCG CGACGGCAGC
GACATGGAGC CGTCGGCGTC GCCGCGCCCG TACCTGCACC CCGTGCGCTC GACCGCCGGG
ACACCGCTCA CCGACGTCCG GCCGGCCGAC CACGTCCACC ACATGGGGGT GTCGATGGCA
CTGCCCGTCG TCGACGGGAC CAGCTTCTGG GGCGGGCGCA CCTACGTGCG GGACCAGGGC
TCGACCCTGC TCGACAACCA CGGGCGGCAG CAGCCCCTCT CGACCGACCT CGAGGGGCCG
CACCTGGTCC AGCACCTCGT GTACCTCGAC GAGCACGGCG TCCCGCTGCT CCGCGAGCGC
CGCCAGGTGA CCGCCGTCGA CCTGACGGGC GGTGCCTGGG CGCTCGGCTG GTCCAGCGAC
CTGCTCGCCT CCGAGAAGGA CCTCGCCTTC GACAGCCCGG CCACGAACGG CCGGGTCGGC
GCCGGGTACG GCGGGGTCCT CTGGAGGCTC GGCGCCGCCG ACTCCCGGCA GGTGCTCAGC
GTCGAGGGCG AGGGCGAGGA CCGAGCGCAC GGCTCGACGA GCCCGTGGGT GGCCTTCGTC
CAGCACCGCG GCACCGAGGC CGTCACCCTC GTCCTCGCCC AGACCGGGAC CGTCCTGCCG
TGGTTCCTGC GGGCTACCGA GTACGACGGT GCAGGTCCGG CCGTCGCGTG GGACCGCACC
CGGACCGTCG CGCAGGGAGA GACCCTGCAC CTCGGGCTCG TGGGGGCGGT CGTCGACCGC
GCGCTCGACC TCGAGGAGGC CGGCGCGCTC GCCGAGCAGG CCGTCGCCGC CCTGCCTGCC
GCCGCACTGC CTGCCGCCGC GGTGCCGTCG ACGCACGGCT GA
 
Protein sequence
MTPPDSPTPS PSSATWQPDG QHGARLVRDH TVLAEYRDGS DMEPSASPRP YLHPVRSTAG 
TPLTDVRPAD HVHHMGVSMA LPVVDGTSFW GGRTYVRDQG STLLDNHGRQ QPLSTDLEGP
HLVQHLVYLD EHGVPLLRER RQVTAVDLTG GAWALGWSSD LLASEKDLAF DSPATNGRVG
AGYGGVLWRL GAADSRQVLS VEGEGEDRAH GSTSPWVAFV QHRGTEAVTL VLAQTGTVLP
WFLRATEYDG AGPAVAWDRT RTVAQGETLH LGLVGAVVDR ALDLEEAGAL AEQAVAALPA
AALPAAAVPS THG