Gene Sked_04770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_04770 
Symbol 
ID8632114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp532456 
End bp533424 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content72% 
IMG OID 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003313273 
Protein GI269793818 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0701227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.5127 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGCT TCAGCGTCGA GCTCCGCGGC GTCGGGGTGA CCTTCGACCG CCCCGCGCTC 
CAGGGCGTCG ACCTCACGCT CGCCCCGGGC GTCGTCCACG GCCTGCTGGG CCGCAACGGC
TCCGGCAAGA CCACCCTGCT CTCGCTCCTC GCGGCGTTCC GACGCCCGAC GCGCGGCACC
GTCCTCGTGG ACGGCGAGGA CCCCTTCGAG AACGAGCGTG TCCTCGAGGG CACCTGCTTC
GTCCGCGAGA GCGGCGACGT CATGGACGAC GAGAAGGTCT CGGTCAACCT CGACTTCGTC
GAGGGGATGC GGCCGGCCTT CGACCGCGCC TACGCCGAGG ACCTGCTCGA CCAGTTCGAG
GTGCCGCTCA GCACCAAGAT CGGCTCCCTG TCCCGCGGGC AGAAGTCCGC GGTCGGCGCC
TCGACGGGCC TCGCGGCCCG GGCCCCGCTG ACCATCCTCG ACGAGGTCTA CCTCGGCATG
GACGCCCCCT CGCGCTACAG GTTCTACGAG GCGCTGCTCC GCGACTACGT CGAGCACCCC
CGCACCGTCG TGCTGTCGAG CCACCTCATC GGCGAGCTCG ACCGGGTGCT CGAGCAGGTG
ACCATCCTGC ACCGCGGCGG TGTCCTGCTG ACCGACACGG CCGACTCGCT CCGGGAGCGC
GGCTCCACCT TCACCGGCCC ACGGGCCGTC GTCGACGACG TGGTGGCCGA CCTCGCGATC
GACGTGCTCG CCCGGACCGA GCTCGGCGGC ACGTCCCAGG TGACGGTCGT CGGCCACCTC
GACGCCCAGG TGCTCGAGCG CGTGCGTCGT GCAGGGCTCG AGGTCGGGCC CGTGGCGCTG
CAGGACCTGT TCGTGCACCT CACGGACGGC CGGGGTGAGC CCGGCAGCGT GCCGACCACG
ACCGGGAAGA CGACCGCAGC CGCGACGGCC GCGGCCACCA CCACCACGAC CGAGGAGGTC
GACCGATGA
 
Protein sequence
MTGFSVELRG VGVTFDRPAL QGVDLTLAPG VVHGLLGRNG SGKTTLLSLL AAFRRPTRGT 
VLVDGEDPFE NERVLEGTCF VRESGDVMDD EKVSVNLDFV EGMRPAFDRA YAEDLLDQFE
VPLSTKIGSL SRGQKSAVGA STGLAARAPL TILDEVYLGM DAPSRYRFYE ALLRDYVEHP
RTVVLSSHLI GELDRVLEQV TILHRGGVLL TDTADSLRER GSTFTGPRAV VDDVVADLAI
DVLARTELGG TSQVTVVGHL DAQVLERVRR AGLEVGPVAL QDLFVHLTDG RGEPGSVPTT
TGKTTAAATA AATTTTTEEV DR