Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_04010 |
Symbol | |
ID | 8632039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 447856 |
End bp | 450480 |
Gene Length | 2625 bp |
Protein Length | 874 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003313202 |
Protein GI | 269793747 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00169592 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGC AGGCCATCAA CGCCACCGGG CTGCCCGGGG CGAACCTCGA CCCCGACGCC GTCGAGGCCG CCGCCGCCGA CCTGCTCACG CAGGCGACGT CGATCCGCGA CCAGGGAGCC GACGTCAAGT CCACCTGGCA GGGCCTCGGC GCCTACTACA AGGCACCCGA GTCCGAGACG CTCGTCGCCG TGATGGACCC GGTCGCCACC ACGACCGACA CCTTCGCGAG CGACCTCGAG CGCGTCTCGG CGGCGCTCAG CACCTACGCG ACCGACATCC GCGACATCAA GGCCTCCCTC GACACCCTCC GCTCCGACAT CGGGACCTTC CGCACCTCGA TCTCCGGCGA CGACGAGTGG CAGTTCGAGC AGGACAACAT CGACACCAAC GACGCGCTCC GCACGCGCGC CGGGAACCTG CAGGTCCAGC TCTGGGAGGC CGAGCGCACC TGCGCCAACG CCATCCGCGC GATCGACTGC ATCGCGCCGT GGACGGCGAG CACCGGCGAC GACGACCCCA ACGGCTACGG GTACTCCGAG ATCCCCGAGG ACGCAGAGAT GCCCTGGGGC TCCCAGGTGC AGCGCGAGGA CCACTGCCCC AAGTCGGCCG CCGTGGGCGT CAAGAGCTTC GTCTGGGACG GCATCGTCAT GGACATCGGC TGGGAAGGCC TCAAGGGCCT CGGCGGCATG ATCGGCCTCG GCGAGGACGG CTTCTCGTGG GAGACCTTCG AGGCGACCTG GGGCGGGATG GGCGCGCTCA TCGGGCGCGA CCCCGAGACC GGTGAGTGGG GCTGGGGAAC CGCCGGCAAC GCCTGGACCG AGACCGGAAA GTCGCTCATC GCGTGGGACA TGTGGGCAGA GGACCCGGCG CGCGCCGCAG GCACCGCGCT CGGCAACATC GCGCTGACCG TCTTCACCTT CGGCGCCGGT GGTGTCGTCA AGGGCACCGC GACCGCCGGC CGGACGGGAC AGGTCCTCTC CGGGATCGGC AAGGGCGCCT CCGTGGTCAA CCGCGTCCTC GACCCGACCG ACCTCATCAT CGGCGGCGCC AAGGCCCTCA AGGGCTTCAA GCTCGACGAC GTGCTCTCCG GCCTGCGGAC CAACCTCAGC GACCTCAGCA CCGGCCTGTC GACGTCGCTG CGCGGCATCG ACATCGACGT GGACATCGAG CTGCCCAACA CCCACCGCGG TGACGGCACC GGTGGCACCG GCGGGAACTC GGGCGTCTTC GACGACAACC CCGCCGTCAA CCGCGGCGGC GACGACGCCG GGGCGACGAA CAACGTCAAC CGCGACGTCG ACGTCTCCAA CGAGCACCCG CGCGCCGAGC AGACCAACAA CACGAACCAG GCCGAGACGC CCGCGCAGCA GCCCGTCGTC GACCTCGTGC GCGAGCACGA GCTCGTCGGG GCCGGTGCGC CCGGCTCACC GTCGACGCAC CACGGGGGCG GGGTCCACCT GATCGACAAC GGTGGCAGCA GCCACAGCGG GTCCGGTGGT GGCGGTGGTG ACGGGACCGG TGGTGGTCAC GGGTCTGGAG GGCACGGCGG GTCCGGAGAC GGCACGCCTG GTGGGCCGGG CGACGGGACG CCCGGAGGAC CTGGCAACGG CTCTGGCGGC GGCGGAGACA ACGGTGGCGG CGGGAACGGC GGCGACGGCA CCGGTGGTGA CGGACCGTAC CGCGGCGACC GCAGCCCCGA CACCCCGCTC GGCAACAAGG CGGGGACGCA GGAGCACTTC AACTACACGC TCGCCCAGGG CCTCGTACGG AACAACCTCA CCGAGGCGAA GTTCGTCGAG CTCCTCGACA CGCCGCTGAA CAAGCTCAGC GCAGACGACC TCTGGGCCTT GCGCGACATC CGCGACTCGC TCCCGGGCGT CACCCCGGAC ACCGTCCTGC AGAAGGTCAT CCCGCCGGAC CTCGCACACA CCTTCATCAA CGACCTCGGC AAGCAGATCG ACATCGACTC CCCCGACGCT GCGGCTCAGC TCGCCGCGTA CGACCGTCTG GTCCGGGAAA ACCCGGAGAT CATGGGCACC ACCCCCACGA GGTATGGGGC ATCAGAGGTG GGAGGCTTCG TCTCTCGATC CGTCGATGTC GGCGACCTGG ACACGAGAGG CACCTACGAC GGGATCGGCC TCGGCTACGA GAACACGAAG TTCGGAGACG CTCAACGGCA GTACGTGGAC CAGAACTACT TCTCCATCGA GTTCGAGGCG GGCAAGACCC AGCCATCCAC CGTCCACTAC GTGACAGACG CGATCGAGGC GCATCACACC GAGCTCTCAC AGCTCAGCCC TGATGCTTTC AAGACACGGC TTCACGAGCT CGTCGAGGAG CAGCACATCG CTCGAGAGCC GAGACCTACG TCGCCGAAGG CTCTCAAGGC CTGGGAAGAA GCCCTGCTGG AGAAGCACAA CCACGTCGAC TACAGCCTCG ATCCCACCAA CCTCCATCGA GGGAACGGCT TCGGAGGAAC GCGGGGGGCG TACACCCCTG AGCTCCAGAT CTTCGGTCGC GTCGAGGTGC CCGCCGGAGC GGAGATGTGG AAGATCGCCC CAGATGGAGA ACGCGTCCTC GTCGCACGCA TGGACAACTT CCAGCAGTGG AAGATGGTCT TGTGA
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Protein sequence | MSAQAINATG LPGANLDPDA VEAAAADLLT QATSIRDQGA DVKSTWQGLG AYYKAPESET LVAVMDPVAT TTDTFASDLE RVSAALSTYA TDIRDIKASL DTLRSDIGTF RTSISGDDEW QFEQDNIDTN DALRTRAGNL QVQLWEAERT CANAIRAIDC IAPWTASTGD DDPNGYGYSE IPEDAEMPWG SQVQREDHCP KSAAVGVKSF VWDGIVMDIG WEGLKGLGGM IGLGEDGFSW ETFEATWGGM GALIGRDPET GEWGWGTAGN AWTETGKSLI AWDMWAEDPA RAAGTALGNI ALTVFTFGAG GVVKGTATAG RTGQVLSGIG KGASVVNRVL DPTDLIIGGA KALKGFKLDD VLSGLRTNLS DLSTGLSTSL RGIDIDVDIE LPNTHRGDGT GGTGGNSGVF DDNPAVNRGG DDAGATNNVN RDVDVSNEHP RAEQTNNTNQ AETPAQQPVV DLVREHELVG AGAPGSPSTH HGGGVHLIDN GGSSHSGSGG GGGDGTGGGH GSGGHGGSGD GTPGGPGDGT PGGPGNGSGG GGDNGGGGNG GDGTGGDGPY RGDRSPDTPL GNKAGTQEHF NYTLAQGLVR NNLTEAKFVE LLDTPLNKLS ADDLWALRDI RDSLPGVTPD TVLQKVIPPD LAHTFINDLG KQIDIDSPDA AAQLAAYDRL VRENPEIMGT TPTRYGASEV GGFVSRSVDV GDLDTRGTYD GIGLGYENTK FGDAQRQYVD QNYFSIEFEA GKTQPSTVHY VTDAIEAHHT ELSQLSPDAF KTRLHELVEE QHIAREPRPT SPKALKAWEE ALLEKHNHVD YSLDPTNLHR GNGFGGTRGA YTPELQIFGR VEVPAGAEMW KIAPDGERVL VARMDNFQQW KMVL
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