7 homologs were found in PanDaTox collection
for query gene Sked_04010 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_04010  hypothetical protein  100 
 
 
874 aa  1760    Sanguibacter keddieii DSM 10542  Bacteria  decreased coverage  0.00169592  normal 
 
 
-
 
NC_014211  Ndas_5048  hypothetical protein  33.89 
 
 
1019 aa  164  9e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.114133  normal  0.746585 
 
 
-
 
NC_014210  Ndas_4050  hypothetical protein  30.3 
 
 
1193 aa  136  1.9999999999999998e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4622  hypothetical protein  34.25 
 
 
1024 aa  129  3e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.119976  normal  0.339061 
 
 
-
 
NC_014210  Ndas_2671  hypothetical protein  29.43 
 
 
916 aa  122  1.9999999999999998e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0489044 
 
 
-
 
NC_014210  Ndas_4574  hypothetical protein  32.93 
 
 
799 aa  72.4  0.00000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_07790  Alpha/beta hydrolase of unknown function (DUF1023)  28.77 
 
 
561 aa  62.4  0.00000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.110321 
 
 
-
 
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