| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_03770 |
|---|
| Symbol | |
|---|
| ID | 8632015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 421527 |
|---|
| End bp | 422519 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | DMT(drug/metabolite transporter) superfamily permease |
|---|
| Protein accession | YP_003313178 |
|---|
| Protein GI | 269793723 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.248396 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGCCG TCGACGTCGG AGCGCCCGTC GCGACGCTCC TGCTGTGGCG CTTCGCCGTG
GTCGTCGCGG TCCTGGCCGT GGTCGTCGCC GCGCTGCGGC GGCGCAGGGT CGGTGCGCGC
CGCGCTGCCC GCGGCGCCGG CGACGAGGGC CACGGCCACA GCGTCGACGT CGACAGCGAC
AGTGACGACG ACGACAGCGA CGACGACGAC GGCGACGGCG ACGACGGCGA CGGCGACGAC
GGCGGCCGGG GTGCGCCCGC GCGTCCCGAG AGAGCCCGCC AGGCGCTCGT CGGCCTGTTC
TCGCAGGTCG GCTACGTGGT GCCCGTCTAC CTCGCGATCG GTCTGGGGGT GAGCACCGGG
ACGACGGCGC TCATCGACGC GGTCCAGCCG CTCGTCGTCG CGACCCTCGT GGGGCCGCTG
CTCGGGCTGC GTGTCCGCGG CGCCCAGTGG GCCGGCCTGG CGGTCGGCGC CGTCGGCGTC
GTGCTCGTGG TCGGCGCCGA CCTCGGGTCG GGGACCGCGC CCTGGACCGC CTACCTGCTG
CCGCTCGCGG CGATGGCGAG CCTCGTGGCC GGGACTTTCG TCGAGCGGCG GCACCCGACG
TCGTCGGGGG TGCTCGACAC GCTGCTCGTC CACGCGGTGG TCGCCCTGCT GGCGATCGGC
GCCTTCGCGG TGCTCGCGGG CCAGGCCGTC CCGCCGACCA CCGCGACCTT CTGGTGGACC
GTCGTCTTCG TCGCGCTGTC GCCGACCCTC GCCGCCTACG GGCTGTACTG GTACCTCGTG
GGCCGGCTGG GCATCACCGC CCTCAACGCG CTGCTGTTCT GCGTCGCCCC GACCACGGCC
GTCGCCGGGG CGCTGCTCTT CGACGAGGTC GTCACCGCCG GGACGCTCGC CGGGCTGGTG
CTCTGCGCGG CGGGCGTCGG CGTCGTGCTG ACCAGCGAGG CCCGTGGCCG ACGGGCAGCG
CGGTCCCTTG CGTCGGTCTC GCCCGCGACC TAG
|
|---|
| Protein sequence | MAAVDVGAPV ATLLLWRFAV VVAVLAVVVA ALRRRRVGAR RAARGAGDEG HGHSVDVDSD
SDDDDSDDDD GDGDDGDGDD GGRGAPARPE RARQALVGLF SQVGYVVPVY LAIGLGVSTG
TTALIDAVQP LVVATLVGPL LGLRVRGAQW AGLAVGAVGV VLVVGADLGS GTAPWTAYLL
PLAAMASLVA GTFVERRHPT SSGVLDTLLV HAVVALLAIG AFAVLAGQAV PPTTATFWWT
VVFVALSPTL AAYGLYWYLV GRLGITALNA LLFCVAPTTA VAGALLFDEV VTAGTLAGLV
LCAAGVGVVL TSEARGRRAA RSLASVSPAT
|
|---|
| |