Gene Sked_03700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_03700 
Symbol 
ID8632008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp412970 
End bp414364 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content71% 
IMG OID 
Productcarbohydrate-binding protein 
Protein accessionYP_003313171 
Protein GI269793716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.720711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGA TCCGCCCCAC CTCCGGCAGC GCCGGAGGCT TGGACCGCGT GACTGCCGGG 
CTCACGACCG GCTCGCCCAC CAGCGGCTCG CTGGCGAGCA CCGCGCTGTC GCGCCGGTCC
TTCGGCAAGC TGCTCGTCGC AGCCGCCGGC ACCGCGGCCC TCACGGCCTG CGCCCCGCGC
AGCGGCACCC CGAGCCCCGA CGCCCCGCTG CGCGTCATGG CCATCAACCA CGTGTGGTCC
CAGGCGATCT CCGCGTACTT CCCGGAGTTC GAGGACATGA TCGGCCGCCG CGTCTCCATG
CAGATGCTCA CCGCCGACCA GCTGTCCAAC TCCTACAACG TCAAGCTCAA CGCCTCCGCT
ACGGACATCG ACGTCATGAT GGTCCGCGCC CTCCAGGAGC AGCTGCTCTT CGCCCGCAAC
GGGTGGATGG CCGACCTCAC CGACCGTGTC GAGGACAGTG CTTTCGAGTG GGACGACTTC
CAGGAGGCGC CGCGCGACCG CTCGGTCACG CGCGACAAGG TGCTCAGCGT CCCTGTCGTC
ACGGAGCGCC CGGCGCTCTA CTACCGCAAG GACCTCGTCG AGGGCTTCGG CGGTGCGCCG
CAGACCCTCG ACGACCTGCT CGCCATGTCC CTCGAGCTCG CCGACCGGGA CAACGGCCAG
TTCGGGTTCG TCGGACGTGG GCAGCGCGCC GGGGCGGTGA GCCAGTGGTC GAGCTTCCTG
TTCTCCCACG GTGGCGACTT CACGCTCGCC GACGGGTCGT CGGGCATCGG CACGCCCGAG
GCCGTCGCCG CCTACGAGTA CTACGGGCGC CTGCTGCACG AGGCCGGGCC TCCCGGGGCC
ACCAACATGA GCCTCGAGCA GGCCATGCCG ATCTTCGCGC AGGGCAAGGC CGCCTTCTAC
GTCGACGCCG ACGCCATCTA CTCCAACTTC TTGGATCCGT CGATCTCGAC CGTCCAGGAG
ACCGTCGGCT TCGCCCCCTT CCCGGCGGGG CCGGCCGGCT CCAAGCCGCA CAACATCCCG
TCGTGGAGCA TCGGCGTCAA CGCCTTCTCG CGGATGCAGG ACGACGCCTG GGCGTTCGTC
CAGTGGGCCT CGAGCCCCGA GATGGTCGCG CGGCTCCAGG CCGAGGGCAT CCCCGGTGCC
CGCCAGTCGG CGTGGTCGGA CCCCGAGACC CTCGCGGCCT TCCCGCCCGA GCTCGCCGAG
ACCATGCGCA TCAACGCCGA GAACGGCATC GGGCACGACC GCCCCGAGGT GATCCAGGTG
GGCCGCGCCC GCGACATCGT CGGCCGCCCG CTCGTCGCCG GGATCCTCGG CGAGGACGTC
GCGCCCGTCG CGGCCGACGC CGACGCCGAG TTCCGCGACT TCCTCGACCG TGACAACCGT
CAGCAGGAGT TCTGA
 
Protein sequence
MSLIRPTSGS AGGLDRVTAG LTTGSPTSGS LASTALSRRS FGKLLVAAAG TAALTACAPR 
SGTPSPDAPL RVMAINHVWS QAISAYFPEF EDMIGRRVSM QMLTADQLSN SYNVKLNASA
TDIDVMMVRA LQEQLLFARN GWMADLTDRV EDSAFEWDDF QEAPRDRSVT RDKVLSVPVV
TERPALYYRK DLVEGFGGAP QTLDDLLAMS LELADRDNGQ FGFVGRGQRA GAVSQWSSFL
FSHGGDFTLA DGSSGIGTPE AVAAYEYYGR LLHEAGPPGA TNMSLEQAMP IFAQGKAAFY
VDADAIYSNF LDPSISTVQE TVGFAPFPAG PAGSKPHNIP SWSIGVNAFS RMQDDAWAFV
QWASSPEMVA RLQAEGIPGA RQSAWSDPET LAAFPPELAE TMRINAENGI GHDRPEVIQV
GRARDIVGRP LVAGILGEDV APVAADADAE FRDFLDRDNR QQEF