| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_03220 |
|---|
| Symbol | |
|---|
| ID | 8631960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 351557 |
|---|
| End bp | 352120 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | predicted flavoprotein |
|---|
| Protein accession | YP_003313124 |
|---|
| Protein GI | 269793669 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.51366 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCA TCGGCATCAT CCTCGGCAGC ACCCGACCCA ACCGCAACGG CGAGCAGGTG
GCCCGCTGGG TCCTCGACAT CGCGTCGCAG CGGGACGGCG TCGAGTACGA GCTCGTCGAC
CTGCGCGACT ACCCGCTCCC CCACCTCGAC GAGCCCGTCC CGCCGTCCAT GGGCGAGCAC
ACCCAGGAGC ACACCAAGCG GTGGGCCGCG AAGATCGCGT CCTTCGACGG GTACGTCATC
GTCACGCCCG AGTACAACCA CTCGACGTCC GGCGTGCTCA AGAACGCCAT CGACTACCTG
TTCCACGAGT GGCACGACAA GGCCGTCGGC TTCGTCTCCT ACGGCTCCGT GGGCGGCGCC
CGCGCCGTCG AGCACCTGCG GCTCGTCGCC GGCGAGCTGA TGATGGCCGA CGTCCGCCAG
CAGGTGACCC TGCCCCTCGC CTCGGAGTTC AAGGACTACT CCGAGCTCAC GCCCTCCGAC
GCGTCCGTCG ACGCCCTCGG CACGCTCCTC GACCAGGTCA CCGCCTGGAG CGAGGCCCTC
GCACCGCTGC GTGCGAGGTC CTGA
|
|---|
| Protein sequence | MTRIGIILGS TRPNRNGEQV ARWVLDIASQ RDGVEYELVD LRDYPLPHLD EPVPPSMGEH
TQEHTKRWAA KIASFDGYVI VTPEYNHSTS GVLKNAIDYL FHEWHDKAVG FVSYGSVGGA
RAVEHLRLVA GELMMADVRQ QVTLPLASEF KDYSELTPSD ASVDALGTLL DQVTAWSEAL
APLRARS
|
|---|
| |