Gene Sked_03130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_03130 
Symbol 
ID8631951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp339980 
End bp341143 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content71% 
IMG OID 
Productpredicted Zn peptidase 
Protein accessionYP_003313115 
Protein GI269793660 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.105125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACC GCGTGAGAGT GCGACCGACG CTGCTCGAGT GGGCTGCGAC CCGCGCCGGG 
CTCGGCGACG ACGAGGTCGC GCGACGCTTC CCGAGCTTCA GCGCCTGGGT CTCCGGTGAC
CGTCGCCCCA CGTTCCGCCA GCTCGAAGGA TTCGCGAAGG CCGTCCACGC CCCGCTCGGG
TACTTCTTCC TCGACGAGCC GCCCGAGGAG CCGGTCCCGC TCCACGACTT CAGGACCTTC
CGCGACGAGC GCGTCAGGCG CCCGTCCCCC GACCTCCTCG ACACGATTCA CCTGTGCCAG
TCCCGCCAGG AGTGGTACCG AGAGCACGCC CTCGCCGAAG GCAGCGAACC CGTCTCCCTC
GTCGGGTCCG TCACCACGAC CGCCCCGGTC CGAGATGTCG CCCGGGGCAT CGCGACGGCC
CTCCGCTTCA CGGTCGAGGA GCGTGGCGCA TACGCCAGCT GGGAGATCGC GCGACGGCGG
CTCATCGACG CCGCCGAAGA CCTCGGCGTC CTCGTGATGG TCAGCGGGAT CGTCGGGAAC
AGCACGCACC GGCGGCTCGA CCCGCAGGAG TTCCGCGGGT TCGCCCTGGC CGACCCGCTC
GCGCCGGTGA TCTTCGTCAA CGGTGCCGAC ACGAAGGCGG CACAGATCTT CACCCTCGTG
CACGAGCTCG CGCACATCGC GGCAGGGCAG ACCGGACTGT CTGACGTCGC CCTCACCGAT
CACGACGGCC AAGCCGACGA GCGATGGGCG AACGAGGTCG CCGCCGAGGT CCTCCTGCCC
CTCGCGGACC TTCGTGAGCA CTACCGCCAG CCGCCCGACG TCGGCGAGCT CGAGCGGCTG
GCGCGGTCGT TCAAGGTCAG CACCCTGGTC GTGGTCAAGC GCGTCTACGA CGCCGGCCTG
CTCGGCTGGG ACGAGTACCG GGAGCTGTAC GACGCCGAGC TCGAGCGTGT CGTAGCGATC
CTCGCGCGAC GCGACGACGG TCCCGGCGGA GGTGACTGGC TCAAGACCCA GCCCTTGCGG
GTGAGCCGGA CCTTCGCCCG GGCCGTCACG ACCGACGCGT TCGAGGGCCG GACGCTGTTT
CGCGACGCCT ACGCACTCGT CGGGGCCGCG AGGCACGAGA GCTTCGAGCA CCTCGCCGCC
GAGGTCGGGG TCGGAGGCCG CTGA
 
Protein sequence
MADRVRVRPT LLEWAATRAG LGDDEVARRF PSFSAWVSGD RRPTFRQLEG FAKAVHAPLG 
YFFLDEPPEE PVPLHDFRTF RDERVRRPSP DLLDTIHLCQ SRQEWYREHA LAEGSEPVSL
VGSVTTTAPV RDVARGIATA LRFTVEERGA YASWEIARRR LIDAAEDLGV LVMVSGIVGN
STHRRLDPQE FRGFALADPL APVIFVNGAD TKAAQIFTLV HELAHIAAGQ TGLSDVALTD
HDGQADERWA NEVAAEVLLP LADLREHYRQ PPDVGELERL ARSFKVSTLV VVKRVYDAGL
LGWDEYRELY DAELERVVAI LARRDDGPGG GDWLKTQPLR VSRTFARAVT TDAFEGRTLF
RDAYALVGAA RHESFEHLAA EVGVGGR