Gene Sked_02230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_02230 
Symbol 
ID8631861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp236083 
End bp237462 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content71% 
IMG OID 
ProductNa+/glutamate symporter 
Protein accessionYP_003313026 
Protein GI269793571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCCCG ACCTCTCCCA GCCGCAGATC ATCGGCCTGT CCTTCGTCGC CCTCGGAGCG 
CTCCTGGGCG CCGGGTGGGT GCTGCGCCGG TCGGTGCGCC CGCTCGGTGC GCTCTACCTG
CCGGTCAGCG TGGTCACCGG CTTCCTCGTG CTGCTCGTCG GGCCGCAGGT CCTCGGCTCG
CTCACCGGGA CCCAGGGCCT GATACCCGGC GCGTTCCTCG ACGTCTGGCG CGTCATGCCA
GGCCTGCTCA TCAACGTGGT GTTCGCCGCG ATCATGATCG GCAAGGTGCT GCCCCGCTGG
GGCGAGCTCT GGGACGCGGC GGCGCCGCAC GCGATCTTCG GGTCGCTCCT CTCCTTCGGC
CAGCTCTTCC TCGGCGGGCT CGCCGTCCTC GTGCTCCTCG GGCCGGTGTT CGGCGTCGCC
CCCGAGGCCG GCTCCCTCCT CGAGATGTCG TTCGCGGGCG GCCACGGCAC GATCGCCGGG
ATGGGCCAGC TGCTCGCCGA CGCCGGGGCG GAGGACCTCG TCGACGTGGG CCTGAGCCTC
GCCACCATCT CGATGATCAC CGGCATCGTC TGCGGCTCCG TCCTGGTGCG GTGGGCGGTC
CGCAGCCCAC GGCTCGCGGT CGCCCGCGAC CAGGTGCACG TCCCGTCGCT CGAGGACGAC
CCCGAGGTGG ACATCGTGCG GCTCTCGCCC GTCGACGAGG ACCAGGACAA CGACCACGGC
ATGCACGCGA CCACCTTCGC CGGGATGCTC ATCCTGCTGG CGATCGCCGT CGCCGTCGTC
ATGCTGTGGA CCGCGCGCTG GGTCGCCGGG CAGCTCGGGT CGGACATCCT CGACTCGTTC
CCGCTGTTCC CGGTCACCGT GATCGGCGGC TTCGTGGTGC AGACCGTCGC CACGCGGCTC
GGGTTCGCCG AGCGGATCGA CAAGCGCGTC GTCGCGGGGA TGTCGTCCGT CGCGCTCGAC
GGCCTGGTGG TCTGCGCGAT CGGCACCATG TCGCTCGCGA CCCTCGGCGA CAACGTCCCC
GTCATCGTGG TCATGACCGT CCTGGGCGTC GGGTGGAGCG TCGTGGCCCT CGTCTGGCTC
GGACCGCGCA TCCACCGCAA GGACTGGTTC GAGCACGCGA TCGCCGACTT CGGGCAGTCG
CAGGGCAACG TCGCGACCGG GTTCGTCCTG GCCGAGATGG TCGACCCGGC ACGACGCACC
ACCACGGCCA ACGACTACGG GTACAAGCAG CTCCCCTACG AGCCGCTGCT CGGCGGCGGC
ATCCTCACGG CCCTGTCCGT GCCGCTCATC ACCGTGTGGG GTCTGCTGCC CTTCACGGTG
GTGTCCGGCC TGGTCGCGGT GGCGCTCGGG GTGTGGGGGT GCGTGCGACG CCGTGGATGA
 
Protein sequence
MVPDLSQPQI IGLSFVALGA LLGAGWVLRR SVRPLGALYL PVSVVTGFLV LLVGPQVLGS 
LTGTQGLIPG AFLDVWRVMP GLLINVVFAA IMIGKVLPRW GELWDAAAPH AIFGSLLSFG
QLFLGGLAVL VLLGPVFGVA PEAGSLLEMS FAGGHGTIAG MGQLLADAGA EDLVDVGLSL
ATISMITGIV CGSVLVRWAV RSPRLAVARD QVHVPSLEDD PEVDIVRLSP VDEDQDNDHG
MHATTFAGML ILLAIAVAVV MLWTARWVAG QLGSDILDSF PLFPVTVIGG FVVQTVATRL
GFAERIDKRV VAGMSSVALD GLVVCAIGTM SLATLGDNVP VIVVMTVLGV GWSVVALVWL
GPRIHRKDWF EHAIADFGQS QGNVATGFVL AEMVDPARRT TTANDYGYKQ LPYEPLLGGG
ILTALSVPLI TVWGLLPFTV VSGLVAVALG VWGCVRRRG