Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_01860 |
Symbol | |
ID | 8631824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 194739 |
End bp | 195830 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | predicted TIM-barrel fold metal-dependent hydrolase |
Protein accession | YP_003312991 |
Protein GI | 269793536 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCTTC ACGACGCCCT GGGCGTGAAC CCGAGCACAC CACCCGTGCC AGACCTGCGC CTCGCCGAGT GGACGCCCCG ACAACAGCTG CGGGTGCCCG AGACCCACGT GGCCCGCGCG GCCGTCCCGG CGGTCGACAT CCACAACCAC CTGGGTCGCT GGCTCACCGA CGACTGGTGC ACCCCCGACG TGGACGCCCT GCTCTCCCTC ATGGACGAGG TGAACCTCAC GACCGTGGTC AACCTCGACG GGTTGTGGGG CGAGGCCCTC GACGCCAACC TCGCGCGCTA CGACCGTGCC CACCCCGGCA GGTTCGTCAC CTTCTGCCAG GTGGAGTGGC CGCTGCTCAG CGAGCCCGAC GGGGTCGAGC GGCTCGTCGC GCAGCTGCGT GACTCGGCCG CGCGGGGGGC TCGCGGGGTC AAGGTGTGGA AGAGCCTCGG GCTGTCGGTC CGCGACGCCT CGGGCGCGCT CGTGCAGCCT GACGACCCGC GGGTGGTGGA GGTGCTCACG GTCGCCGGCG AGCTCGGCCT CCCGGTGCTC ATCCACGTGG CCGACCCGGT CGCCTTCTTC GATCCTCTCG ACGCGCACAA CGAGAGGTTC GACGAGCTCG CCGGCCAGCC TGACTGGTCC TTCGCGGACC GGGCGGTGTA CCCCTCGTTC CACGGTCTCC TCGGAGCTCT CGAGGCGCTC GTGCGCGCGA CGCCGGGCAC CACGTACATC GGCGCCCACG TGGGCTGCGT CGCGGAAGAC CTGGACCACG TGTCGAGGCT GCTGCGCGAG CTGCCGAACT TCTTCGTCGA CACCGCGGGC CGCGTCGCCG AGCTGGGGCG CCAGCCGCGG CGGTTCCGTC GCCTGCTCGA GGAGTTCCCC GACAGGGTGC TCTTCGGCAC GGACATCTTC CCCCTCGAGC GCGCCGGTCT CGAGACGTAC TTCAGGTTCC TCGAGAGCGA CGACGAGAGC TTCCCCTACG CACCCGGCGC GAGCATCCCT CCGCAGGGGC GGTGGACGGT CTCCGGCGCC GACCTCCCGG TCGACCTGCT GACCTCGCTC TACAGCACCA ACGCGCGTCG CATACTGGGT CTCGGCGAGT GA
|
Protein sequence | MPLHDALGVN PSTPPVPDLR LAEWTPRQQL RVPETHVARA AVPAVDIHNH LGRWLTDDWC TPDVDALLSL MDEVNLTTVV NLDGLWGEAL DANLARYDRA HPGRFVTFCQ VEWPLLSEPD GVERLVAQLR DSAARGARGV KVWKSLGLSV RDASGALVQP DDPRVVEVLT VAGELGLPVL IHVADPVAFF DPLDAHNERF DELAGQPDWS FADRAVYPSF HGLLGALEAL VRATPGTTYI GAHVGCVAED LDHVSRLLRE LPNFFVDTAG RVAELGRQPR RFRRLLEEFP DRVLFGTDIF PLERAGLETY FRFLESDDES FPYAPGASIP PQGRWTVSGA DLPVDLLTSL YSTNARRILG LGE
|
| |