Gene Sked_01860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_01860 
Symbol 
ID8631824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp194739 
End bp195830 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content71% 
IMG OID 
Productpredicted TIM-barrel fold metal-dependent hydrolase 
Protein accessionYP_003312991 
Protein GI269793536 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTTC ACGACGCCCT GGGCGTGAAC CCGAGCACAC CACCCGTGCC AGACCTGCGC 
CTCGCCGAGT GGACGCCCCG ACAACAGCTG CGGGTGCCCG AGACCCACGT GGCCCGCGCG
GCCGTCCCGG CGGTCGACAT CCACAACCAC CTGGGTCGCT GGCTCACCGA CGACTGGTGC
ACCCCCGACG TGGACGCCCT GCTCTCCCTC ATGGACGAGG TGAACCTCAC GACCGTGGTC
AACCTCGACG GGTTGTGGGG CGAGGCCCTC GACGCCAACC TCGCGCGCTA CGACCGTGCC
CACCCCGGCA GGTTCGTCAC CTTCTGCCAG GTGGAGTGGC CGCTGCTCAG CGAGCCCGAC
GGGGTCGAGC GGCTCGTCGC GCAGCTGCGT GACTCGGCCG CGCGGGGGGC TCGCGGGGTC
AAGGTGTGGA AGAGCCTCGG GCTGTCGGTC CGCGACGCCT CGGGCGCGCT CGTGCAGCCT
GACGACCCGC GGGTGGTGGA GGTGCTCACG GTCGCCGGCG AGCTCGGCCT CCCGGTGCTC
ATCCACGTGG CCGACCCGGT CGCCTTCTTC GATCCTCTCG ACGCGCACAA CGAGAGGTTC
GACGAGCTCG CCGGCCAGCC TGACTGGTCC TTCGCGGACC GGGCGGTGTA CCCCTCGTTC
CACGGTCTCC TCGGAGCTCT CGAGGCGCTC GTGCGCGCGA CGCCGGGCAC CACGTACATC
GGCGCCCACG TGGGCTGCGT CGCGGAAGAC CTGGACCACG TGTCGAGGCT GCTGCGCGAG
CTGCCGAACT TCTTCGTCGA CACCGCGGGC CGCGTCGCCG AGCTGGGGCG CCAGCCGCGG
CGGTTCCGTC GCCTGCTCGA GGAGTTCCCC GACAGGGTGC TCTTCGGCAC GGACATCTTC
CCCCTCGAGC GCGCCGGTCT CGAGACGTAC TTCAGGTTCC TCGAGAGCGA CGACGAGAGC
TTCCCCTACG CACCCGGCGC GAGCATCCCT CCGCAGGGGC GGTGGACGGT CTCCGGCGCC
GACCTCCCGG TCGACCTGCT GACCTCGCTC TACAGCACCA ACGCGCGTCG CATACTGGGT
CTCGGCGAGT GA
 
Protein sequence
MPLHDALGVN PSTPPVPDLR LAEWTPRQQL RVPETHVARA AVPAVDIHNH LGRWLTDDWC 
TPDVDALLSL MDEVNLTTVV NLDGLWGEAL DANLARYDRA HPGRFVTFCQ VEWPLLSEPD
GVERLVAQLR DSAARGARGV KVWKSLGLSV RDASGALVQP DDPRVVEVLT VAGELGLPVL
IHVADPVAFF DPLDAHNERF DELAGQPDWS FADRAVYPSF HGLLGALEAL VRATPGTTYI
GAHVGCVAED LDHVSRLLRE LPNFFVDTAG RVAELGRQPR RFRRLLEEFP DRVLFGTDIF
PLERAGLETY FRFLESDDES FPYAPGASIP PQGRWTVSGA DLPVDLLTSL YSTNARRILG
LGE