Gene Sked_01580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_01580 
Symbol 
ID8631796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp164564 
End bp165568 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content76% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003312964 
Protein GI269793509 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.933038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTGGG AGACCGCCCT CGACGTCCTG CTCGCGACGA GCGTGCTGGG TGTCGCCGTC 
GCGACCCTCT TCGCCCCGAG GCGCACCTCC TCGGTCATGC TCTTCCTCGT GCTGGGCCTG
CTGCTCGTCC TCGTGTGGAC GCGGCTCGGT GCCCCCGACG TGGCCCTCGC CGAGGCGGCG
ATCGCGTCGG GCGTCACCGG GGCGCTCCTC GTCTCGGCGC TCACCCGCCG CTCGGCCGCC
GGGTCTGCCG AGGCGCCCCG CGGCGGCTGG CGCTCGGCCG CCGCCGAGCT CGCCGTCGCG
GGTACCGGCG GGGTGCTGCT GGGCGGCGTC CTCGTGGGCG CCGCACGCGA CGGGCTGCGC
CCGGACCGGC TCGGCGACCT CGCGCTCGAC GTCGACGGGG TGGTCGACCA ACCGGTCACC
ACCGTGCTCC TCGACCTGCG CGCCCTCGAC ACGCTCCTCG AGGTCGCCGT CCTCGCCGCG
GCCGTGCTCG CCGCTCTCGC CGTCCACCGC GAAGGAGAGT CCTCGATCGG GATCCGGTCC
GACACGCGTC CCGTGCTCGT GAGCTTCGTG CGTCTCACCA CCCCCGTGGT GCTGCTGCTG
ACCGGGTGGT TCCTCGTCGC CGGCTCGTCC CGCCCGGGGG GCGCCTTCCA GGCCGGCGCG
GTGCTCGCGG GCGCGGCCCT GCTGCTGCTC CTCACCGGAC GCAAGGACCT CGTCCCCACC
GGGCGGTGGC TGCGACCGGC CGTCGTGCTG GGGCTCGCGG TGTTCCTCGC CGCCGCGGTG
CTCACGCGCC TGGTCGAGGG TGGCTGGCTC GACCTGCCCG CGTCGTGGGG CGTCACCGTC
GTCCTGGTCG TCGAGACCGC TCTCGTGGTG AGCATCGCCG CCGGCCTCAC CGTCCTCGTG
GTGCTCTCTC GACCCCGCTA CGTCGACGCG GCCGCGTCCA CCGAGAGCCT CGGGGGCACC
GAGCCCGCCG ACGCACCCGC GCGACAGACG GAGGAGCTCA CGTGA
 
Protein sequence
MSWETALDVL LATSVLGVAV ATLFAPRRTS SVMLFLVLGL LLVLVWTRLG APDVALAEAA 
IASGVTGALL VSALTRRSAA GSAEAPRGGW RSAAAELAVA GTGGVLLGGV LVGAARDGLR
PDRLGDLALD VDGVVDQPVT TVLLDLRALD TLLEVAVLAA AVLAALAVHR EGESSIGIRS
DTRPVLVSFV RLTTPVVLLL TGWFLVAGSS RPGGAFQAGA VLAGAALLLL LTGRKDLVPT
GRWLRPAVVL GLAVFLAAAV LTRLVEGGWL DLPASWGVTV VLVVETALVV SIAAGLTVLV
VLSRPRYVDA AASTESLGGT EPADAPARQT EELT