Gene Sked_01070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_01070 
Symbol 
ID8631745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp110667 
End bp111626 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content73% 
IMG OID 
Productmonosaccharide-binding protein 
Protein accessionYP_003312914 
Protein GI269793459 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTCA CCACCCGAGG CCGCCTCGCA GCAGCCGTCC TGACCACCTC CCTCGTCCTC 
GCCGGCACCG CAGCCTGCGG GCGCGGCGAC ACCGACGGCG CCGGCTCCGG CGAAGGGTCC
GGCGAGTCCG TGACCCTGTC GCTGTCCACC CTCAACAACC CGTTCTTCGT CGACGTGCGC
GACGGCGCCC AGGAGGCCGC CGACGAGCTC GGCATCGACC TCACCGTCGT CGACGCCCAG
AACGACTCGA CCGCGCAGAC CGACCAGATC GCCTCCGCGG TCTCCTCCGG GACGAGCGGC
CTGCTCATCA ACGCCGTCGA CTCCGACGCC GCCGCGGCAG CCGTCGCACC GGCCCTCTCG
GGCGACCTGC CCGTCATCGG CGTCGACCGC GCCGTGAACG GCGCCGAGAT CACCTCGCTC
GTCTCGAGCG ACAACGTCGC CGGCGGGAGC CAGGCGGCCG ACGCGCTCGC CGCCGCCATC
GGCGAGGAGG GCAAGGTCAT CGTCCTCCAG GGCCAGCCGG GCACGTCCGC CAGCCGCGAC
CGCGGCGCCG GCTTCACCGA GGGCATCGCC GCCTACCCGG GCATCGAGGT CGTGGCCATG
CAGACCGCGA ACTTCGACCG CGCGCAGGCC CTCGACGTCG CCACCAACCT GCTCCAGGCC
AACCCCGACG TGGTCGGCAT CTTCGCCGAG AACGACGAGA TGGCCCTCGG TGCCATCCAG
GCCCTCGGCG CCCGCGCCGG CGACGACGTC CACGTGGTCG GCTTCGACGG CACCGACGAC
GGCCTCGCCG CCGTCGAGGC CGGCACCCTC GAGGCGACCA TCGCCCAGCA GCCCCGCGAG
CTCGGACGCC AGTCCGTCCA GCTCATGGCC GACGTGCTCG CCGGCGAGAC CGTCGACAGC
GAGGTCCCCG TGGCCGTCGA GACCGTGACC GTCGACAACG TGGGGGACTA CCAGTCGTGA
 
Protein sequence
MTFTTRGRLA AAVLTTSLVL AGTAACGRGD TDGAGSGEGS GESVTLSLST LNNPFFVDVR 
DGAQEAADEL GIDLTVVDAQ NDSTAQTDQI ASAVSSGTSG LLINAVDSDA AAAAVAPALS
GDLPVIGVDR AVNGAEITSL VSSDNVAGGS QAADALAAAI GEEGKVIVLQ GQPGTSASRD
RGAGFTEGIA AYPGIEVVAM QTANFDRAQA LDVATNLLQA NPDVVGIFAE NDEMALGAIQ
ALGARAGDDV HVVGFDGTDD GLAAVEAGTL EATIAQQPRE LGRQSVQLMA DVLAGETVDS
EVPVAVETVT VDNVGDYQS