Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_00340 |
Symbol | |
ID | 8631673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 35100 |
End bp | 35666 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | protein-tyrosine-phosphatase |
Protein accession | YP_003312844 |
Protein GI | 269793389 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.662786 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACT CCTCGCAGAC CAGCACCCCG CCCGCACGCA TCCTGCGGAT CATGACCGTC TGCACCGGCA ACATCTGCCG CTCGCCGATG GCCGAGGTCG TGCTGCGCGA CCGGCTCGAG GCTGCCGGGC TCGCAGGCCG CGTCGTCGTC GACTCGACCG GGGTGAGCTC GGAGGAGCAC GGCAACCCCA TGGACCGCCG AGCACGCGCC GTGCTGACCG CGGCCGGCTA CACCGACGCC GCCCTCGACC GGCACTCGGC ACGCCAGGTC GGCGCCGCCG ACCTCGGCGA CCGTGACCTG CTGCTGCCGA TGACGGCGTC GCACGCCGCC GCGCTGCGCC GCCTCGCCGA GCGCAGCGGC CAGCCGGACA GTGTTGGCGA CATCGTCATG TTCCGTACCT TCGACCCGGC CGCCCCGGCG ACGCGCGGGG TGCAGGACGA GCACCTCCTC GACGTCGAGG ACCCCTGGTA CGGCGGTCCG GCCGACTTCG AGGAGTGCCT CGCGCAGGTC GAGGCGGCCG TCGACGGGGT CGTCGAGTGG GCCCGCGCCC GGCTCGGGCA CGAGTGA
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Protein sequence | MTDSSQTSTP PARILRIMTV CTGNICRSPM AEVVLRDRLE AAGLAGRVVV DSTGVSSEEH GNPMDRRARA VLTAAGYTDA ALDRHSARQV GAADLGDRDL LLPMTASHAA ALRRLAERSG QPDSVGDIVM FRTFDPAAPA TRGVQDEHLL DVEDPWYGGP ADFEECLAQV EAAVDGVVEW ARARLGHE
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