| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_4066 |
|---|
| Symbol | |
|---|
| ID | 8599510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 4329232 |
|---|
| End bp | 4331004 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | |
|---|
| Product | glycoside hydrolase family 2 sugar binding protein |
|---|
| Protein accession | YP_003310829 |
|---|
| Protein GI | 269122652 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATAGAA ATGAATATCC CAGACCGGAT TTTGTGAGGG AACATTGGGC TTGTCTAAAC
GGTATATGGG ATTTTGAATT TGATGATAAT AATATCGGAA TGTCATCAAA ATGGTATAAA
AAAGATCATA AGCTTACTGA AAAAATCAAT GTTCCTTTTG TTTTTCAATC AAAGCTAAGT
AATATCAATA TAAATGATTT TCACGATTTT ATCTGGTATA AAAGAGAATT TACAATAGAT
GATTCCTGGA AAAATAAAGA TATTTTACTG CATTTCGGAG CCGTGGATTA CAGATGTCAT
GTTTTTATCA ACGGAGAGCT GGCAGGAAGC CACGAAGGCG GACACACTTC CTTTTATCTG
AATATCACCA ATTATCTTAC ATGGAATAAA GAGGAAATAA CTGTATATGT AGAAGATCCT
TCTGATGATG AGACTATCCC AAGGGGAAAG CAATACTGGC TTGAAAATCC CGAGAGTATT
TGGTATAAGC GTTCCAGCGG CATCTGGCAG TCTGTCTGGA TTGAACCTGT TAATAAAAAC
TATATCACAG ACTTTAGATG TACTCCTTTA TTTGATCAGG GTTCTGTAGA ATTTAACATA
AAAACAAAAT CTGCCAAAAA AAATACAAAA ATCATGATAC AAATCTCATT TAGGGATACC
CTGATAGCTG AAGATATAAT AACTGTCAAT AATATTGAAA CTAAACGTAT CTACGATATT
TTTCAAAAGA AAATTTTCAG AGGCTGCACG CATGGTTCCG GATGGACATG GACTCCTGAA
AATCCTAATT TATTTGATGT TACACTTACT CTTCTTACCA ATGACAAAGT CTCAGATAAA
ATAGAAAGTT ATTTTGGAAT GAGAAAAATA CATACTGAAA ACGGAAAAGT ATACCTGAAT
AACAGACCTT ATTATCAAAG ACTGGTACTG GATCAGGGCT ACTGGCCCGA CAGCCTTATG
ACAGCCCCTT CTGATGAGGA TTTTAAAAAA GATATTATAC TGGCAAAACA GATGGGCTTT
AACGGATGCA GAAAACATCA AAAGATAGAA GACCGGCGTT TTCTTTACTG GGCTGATAAA
CTCGGCTATC TTGTATGGAG CGAGATGCCC AGCACTATCT CATATGATTC GAATTCTGTT
TCCAGAATTA CAAATGAATG GATAGAATCC GTAGACAGAG ATTATAATCA TCCCTGTATT
GTTACATGGG TTGCATTAAA TGAAAGCTGG GGTGTTTCGG AAATTAATTA TAATAAAATG
CAGCAAAGCC ACTCACTTTC TTTATATTAT ATGCTTCACT CGCTTGACAA TACCAGACCG
GTTATTGCAA ATGACGGATG GGAAGCTACA AAAACTGATA TTTGCGCTGT ACATAATTAC
CAACATGGTA CAAAAGATGA GAAAGAAAAA TATGAGAAAT TTATCAAAGA TTTGAGTACA
AAAGAAGACA TACTGGACTC TGTACCGGCG GGGCGTAATA TTTATGCTGA CGAATTCGAA
TATACCGGCG AGCCTGTTAT GCTCACAGAA TTCGGCGGGA TCGGCTATGA TAAAATCCGT
CCTGACGGCT GGGGATACAC AGTTGCTTCC AGTGAAGCAG AATTTATTCA TGATTTAGAG
CGTGTCTTCG ATGCCCTGCG AAAATCAAAA GTATTAACCG GATTCTGCTA TACACAGTTT
ACTGATGTAG AACAGGAAAT AAACGGTCTT CTTACTTATG AGCGTGAACC AAAATGTGAT
TTGGAAATTA TAAAAAATAT TGTAGAAAAG TAA
|
|---|
| Protein sequence | MHRNEYPRPD FVREHWACLN GIWDFEFDDN NIGMSSKWYK KDHKLTEKIN VPFVFQSKLS
NININDFHDF IWYKREFTID DSWKNKDILL HFGAVDYRCH VFINGELAGS HEGGHTSFYL
NITNYLTWNK EEITVYVEDP SDDETIPRGK QYWLENPESI WYKRSSGIWQ SVWIEPVNKN
YITDFRCTPL FDQGSVEFNI KTKSAKKNTK IMIQISFRDT LIAEDIITVN NIETKRIYDI
FQKKIFRGCT HGSGWTWTPE NPNLFDVTLT LLTNDKVSDK IESYFGMRKI HTENGKVYLN
NRPYYQRLVL DQGYWPDSLM TAPSDEDFKK DIILAKQMGF NGCRKHQKIE DRRFLYWADK
LGYLVWSEMP STISYDSNSV SRITNEWIES VDRDYNHPCI VTWVALNESW GVSEINYNKM
QQSHSLSLYY MLHSLDNTRP VIANDGWEAT KTDICAVHNY QHGTKDEKEK YEKFIKDLST
KEDILDSVPA GRNIYADEFE YTGEPVMLTE FGGIGYDKIR PDGWGYTVAS SEAEFIHDLE
RVFDALRKSK VLTGFCYTQF TDVEQEINGL LTYEREPKCD LEIIKNIVEK
|
|---|
| |