Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_3883 |
Symbol | |
ID | 8599329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | - |
Start bp | 4134533 |
End bp | 4134949 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | |
Product | toxin secretion/phage lysis holin |
Protein accession | YP_003310648 |
Protein GI | 269122471 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAT TGGATTTAAC AATAATAACA ACAGGAACAT TAGCAATATT CACATATCTG TTTGGAACAT TTGATATATT AATACAGGGA GCTTTTATGT TTATTGTATT GGATTTTACA ACTGGACTGA TAAAAGCATG GCATAATGGT GAAGTGAGCA GTACGAAGAG CAGGAAAGGT CTGGTAAAGA AGACAATGTT TTTATCAATG ATATTAATAG GTCATTGGCT GGATAAAGCA AGTTTGATAC CGGATAATAC AGGAATGAGC TTTAGAACAC TGGTGTTGGT GTTTATAGTA GCAAATGAAG GAATATCAAT ACTGGAAAAT ATATCAGAAA TGGGAGTACC GATACCCGGA TTTTTGAGAA AAGTATTTGA GAGATTGGAT AATGAAAAAG ATGAGGAACC TGATTAA
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Protein sequence | MNKLDLTIIT TGTLAIFTYL FGTFDILIQG AFMFIVLDFT TGLIKAWHNG EVSSTKSRKG LVKKTMFLSM ILIGHWLDKA SLIPDNTGMS FRTLVLVFIV ANEGISILEN ISEMGVPIPG FLRKVFERLD NEKDEEPD
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