Gene Sterm_3883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3883 
Symbol 
ID8599329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp4134533 
End bp4134949 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content33% 
IMG OID 
Producttoxin secretion/phage lysis holin 
Protein accessionYP_003310648 
Protein GI269122471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAT TGGATTTAAC AATAATAACA ACAGGAACAT TAGCAATATT CACATATCTG 
TTTGGAACAT TTGATATATT AATACAGGGA GCTTTTATGT TTATTGTATT GGATTTTACA
ACTGGACTGA TAAAAGCATG GCATAATGGT GAAGTGAGCA GTACGAAGAG CAGGAAAGGT
CTGGTAAAGA AGACAATGTT TTTATCAATG ATATTAATAG GTCATTGGCT GGATAAAGCA
AGTTTGATAC CGGATAATAC AGGAATGAGC TTTAGAACAC TGGTGTTGGT GTTTATAGTA
GCAAATGAAG GAATATCAAT ACTGGAAAAT ATATCAGAAA TGGGAGTACC GATACCCGGA
TTTTTGAGAA AAGTATTTGA GAGATTGGAT AATGAAAAAG ATGAGGAACC TGATTAA
 
Protein sequence
MNKLDLTIIT TGTLAIFTYL FGTFDILIQG AFMFIVLDFT TGLIKAWHNG EVSSTKSRKG 
LVKKTMFLSM ILIGHWLDKA SLIPDNTGMS FRTLVLVFIV ANEGISILEN ISEMGVPIPG
FLRKVFERLD NEKDEEPD