Gene Sterm_3793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3793 
Symbol 
ID8599239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand- 
Start bp4031867 
End bp4032568 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content34% 
IMG OID 
ProductCarboxymuconolactone decarboxylase 
Protein accessionYP_003310558 
Protein GI269122381 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0130032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATA AATTACTGAT ACTTTTAATC TCATTATTTA CTTTTGGTTT TACATCGGCT 
GCGGGTATAA TGAAAAAAGA AGGCTTAACT GAAAAAGAAC AAAAAATAGT AATGATTTCT 
GCATTTACAG CAGACGGAAA TCTTGAAAAA TTAAATAAAG CTTTGAACGA AGGGCTTGAT 
GCAGGACTTA CCGTGAATGA AATAAAGGAA GTTTTAGTTC ATTTATATGC TTACAGTGGT 
TTTCCGCGCA GTTTAAACGG ATTAGCGACT TTTATGGAAG TCTTGAAAGA TAGAGAAGCG 
AGAGGAATAA AAGATCAGGA CGGAAGAAAT TCAACACCAG TTCCCAAGGA TAGGGACAGT 
GTTAAATATG GTACTGATGT TCAGACAGAA TTAGTAGGAA TGCCTGTCAC AGGAGAAATT 
TATAGCTTTG CTCCGGATAT AGATGAATAT TTGAAAGGGC ATTTATTTGG CGATATATTC 
GGCCGCGATA TTTTGGATTA CAGAACAAGA GAAATAGTAA CAATATCTGC TCTGACTAGT 
ATGAATGGTG TAAATCCACA GCTTGCTGGT CATTTTAACA TAGGAATGAA TACCGGGATA 
ACAAAAGAAG AGATAGAAGA AATAATAGTT ATTTTTAAAG AAAAAATAAA CAGAAAACAA 
GCAGACAATG CTGAAAAAGT CTTTGAGTCC GTTCGAAAAT AG
 
Protein sequence
MENKLLILLI SLFTFGFTSA AGIMKKEGLT EKEQKIVMIS AFTADGNLEK LNKALNEGLD 
AGLTVNEIKE VLVHLYAYSG FPRSLNGLAT FMEVLKDREA RGIKDQDGRN STPVPKDRDS 
VKYGTDVQTE LVGMPVTGEI YSFAPDIDEY LKGHLFGDIF GRDILDYRTR EIVTISALTS 
MNGVNPQLAG HFNIGMNTGI TKEEIEEIIV IFKEKINRKQ ADNAEKVFES VRK