Gene Sterm_3486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_3486 
Symbol 
ID8598936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp3690214 
End bp3691347 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content36% 
IMG OID 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003310255 
Protein GI269122078 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTATAA AATTAAAAGG AATAACATGG GCGCATACCA GAGGGTATGT TCCTATGGTT 
GCCACAGCAC AAAGATTTAA CGAACTTAAT CCGGAAATTG AAATAGAATG GGAAAAACGC
TCTCTCAGAG ATTTTGAAAA TGCTCCTGTG GAACAATTGG CTGAAAAATA TGACTTACTG
ATTATTGATC ATCCGTGGGC TGGATTTGCA TCAAAAAACG GCGTTTTAAT TCCGCTTGAA
AAATATTTAT CCAAAGATTT TTTAGATGAT CAGCTTAAAA ATTCCGTTGG CCAGTCTCAT
TTGAGCTATA ATTTTGACGG GTTTCAGAGT GCCTTGGCTG TTGATGCCGC CTGTCCAGTT
TGTGTTTACA GACCTAAATA CTTTGCTGAT AAAAATCTGC CTAAAGACTG GAATGAATTA
TTGGAATTAG CGAAAACAGG TATAGTTATT TTTGCAGGAC AGCCGATTTA TCTATTGATG
GATTTCTACA TGCTCTGTTC TACATTAAGT GATAACCTGT TTAAAACAGA TAAAGTTATT
GATGATGATA CTGGTATTTT GGTATTAGAA AAGATGCGGG AGCTTGCCGG TTACTGTACA
AAAGAAATTT TCAGCTGGAA TACAATAAAA GTTAATGAAA TTCTGTCTTC AGAATCGGAT
TATTATTACT GCCCTTATGT TTACGGCTTT TCCAATTATT CAAGAGCCGG ATATGCCAGG
CATATTTTGA AAGCTGGCGA TATCATTCAA TATGAGGGAA GACAAATGAG TGCTGTATTA
GGCGGAACAG GTTTGGCAGT TTCGAGCAAA TGCAGGAATA TTGGCGCTGC AATAAAATAT
GTTGAATTCA CCGCTTCCAA AGAAATTCAA AAAACTTTGT TATTTGATAA CGGCGGACAG
CCGGGACACA GAGAAGCCTG GCTTGATAAT GAAGTCAACA GAAGAAGTCT GAATTTCTTC
AAGGATACAC TCAAAACACT TGATAATTCT TATTTAAGAC CACGTTATGA CGGCTATTTA
TATTTTCAGG ATAATGCCGG AGAGATAGTC AGAGATTTTA TTAAAGACGG CGGAAATGTT
AAAGACACTT TAGAGAAGAT AAACAGTTTA TATAAAAAAT CTAGGAGTAA ATAA
 
Protein sequence
MGIKLKGITW AHTRGYVPMV ATAQRFNELN PEIEIEWEKR SLRDFENAPV EQLAEKYDLL 
IIDHPWAGFA SKNGVLIPLE KYLSKDFLDD QLKNSVGQSH LSYNFDGFQS ALAVDAACPV
CVYRPKYFAD KNLPKDWNEL LELAKTGIVI FAGQPIYLLM DFYMLCSTLS DNLFKTDKVI
DDDTGILVLE KMRELAGYCT KEIFSWNTIK VNEILSSESD YYYCPYVYGF SNYSRAGYAR
HILKAGDIIQ YEGRQMSAVL GGTGLAVSSK CRNIGAAIKY VEFTASKEIQ KTLLFDNGGQ
PGHREAWLDN EVNRRSLNFF KDTLKTLDNS YLRPRYDGYL YFQDNAGEIV RDFIKDGGNV
KDTLEKINSL YKKSRSK