| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_3305 |
|---|
| Symbol | |
|---|
| ID | 8598757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 3478212 |
|---|
| End bp | 3479393 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | |
|---|
| Product | tryptophan synthase, beta subunit |
|---|
| Protein accession | YP_003310076 |
|---|
| Protein GI | 269121899 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.980643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA AATCTTATTA TGGAAATTTC GGGGGACAGT TTGTTCCTGA AACTATTATG
AATGCACTGA TTGATCTTGA AAATGAATAT GAAAAAACCA TTGATGATAA AAAATTCAGA
GACGAATTTC AAAGTCTGCT GAAAGACTTC GTAGGAAGAG AAACTCCTTT ATACCACGCA
AAAAATCTGA GTGAATTTTA CGGGCATAAT ATATTTTTAA AAAGAGAAGA TCTGAACCAC
ACAGGAGCTC ATAAAATAAA TAATGCACTT GGTCAGGCTC TTCTTGCCAA AAGAATGGGT
AAAAAGAAAG TAATTGCTGA AACAGGTGCA GGACAGCACG GTGTTGCCGC AGCTACTGCC
GCTGCTCTTC TGGGTATGGA ATGTGATGTA TATATGGGAG CTGTAGATAT CGAAAGACAA
AGGCTGAATG TTTTTCGTAT GGAACTCCTC GGAGCCAGAG TCATTTCAGT GGAGGAAGGG
CTGAAAACCC TGAAAGAGGC TACTACCGCT GCTATTCAGG CATGGGTCAA TGAAGTAGAG
GATGTATTTT ATATTATTGG TTCCGTAGTA GGACCATATC CATATCCAAA AATGGTAAAA
GATTTTCAGT CTGTCATCGG TGATGAGACA AAAAAACAAA TGGAGAAATA TGGAAATACT
GACTGTATTA TTGCCTGTGT GGGCGGCGGC AGTAATGCCA TGGGTATTTT TTCCGCTTTT
CTTGATAATG AAGATACGGC ATTGTACGGT ATTGAAGCCG GAGGAAAAGG AATTGACACA
GAAGAGCATG CAGCTACCCT TAGTATGGGA AGTCCGGGAA TACTCCACGG TATGAAAACT
TATGTTCTTC AGGATAAATA CGGGCGGATA AATCCTGTTC ACTCTATATC AGCAGGGCTT
GATTATCCCG GAGTCGGTCC CGAACACTCT TATCTTTTTG ATACTAAAAG AGTAACATAT
GCGGCGGTTA CTGATGATGA AGCTATAGAA GCACTTCTGC TGCTCACACA AAAAGAAGGA
ATAATTCCCG CTATAGAAAG TGCACATGCA GTGGCCTATC TAAAAAAACT ATGCCCTGTA
TTAAAAGAAA AGAAAAACAT TGTTGTAAAT ATTTCAGGAC GCGGAGATAA AGATATGCAT
ACAGTATTTT CAATATTAAA AGGAGGAGAA ATCCATGAAT AA
|
|---|
| Protein sequence | MNKKSYYGNF GGQFVPETIM NALIDLENEY EKTIDDKKFR DEFQSLLKDF VGRETPLYHA
KNLSEFYGHN IFLKREDLNH TGAHKINNAL GQALLAKRMG KKKVIAETGA GQHGVAAATA
AALLGMECDV YMGAVDIERQ RLNVFRMELL GARVISVEEG LKTLKEATTA AIQAWVNEVE
DVFYIIGSVV GPYPYPKMVK DFQSVIGDET KKQMEKYGNT DCIIACVGGG SNAMGIFSAF
LDNEDTALYG IEAGGKGIDT EEHAATLSMG SPGILHGMKT YVLQDKYGRI NPVHSISAGL
DYPGVGPEHS YLFDTKRVTY AAVTDDEAIE ALLLLTQKEG IIPAIESAHA VAYLKKLCPV
LKEKKNIVVN ISGRGDKDMH TVFSILKGGE IHE
|
|---|
| |