Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_3231 |
Symbol | |
ID | 8598684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 3383879 |
End bp | 3384631 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003310003 |
Protein GI | 269121826 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAAA ATTCCTATTA TATCTATGAT AAGGTTTCAA AAACAGAACT GGTTCTATAC ACTGACTCGT CTCTTTCATA TCCTTTACAT AATCATTCCA GTATTTTTTC AATCGGGATA ATTTTAAACG GCAGCATCAG ACTCTGTAAA GACGGATATT CTTCTATATA TACTGCCGGT CAGATTTTCA TTATTCCCCC GTATGTTCCG CATGCTTTGT ATTCTATAGG AAAGGCTTCC CTTCTGACTA TATGCATAAA TAAAAATAAA GCTTCGGAAA TTGATATAAA TAAAATCATA AACCGTATAA TTTTCTTATA TACCAAGACA TTTAATTTAG GCTCTTTAAG CGGTACACAG CTTTTACTGC TGGCTGAAAA TCTCTCATAC TGCAAACATT TTTCTGCATA TAAATCTGTA ACTCCGCAAA TAAAAGAACT GCGGCAAATA TTGGAATTTT CTCCAGAAAT AACTATAAAT ATCGAAAAAA TGGCAAAATC AGCATATATG AGCAAGTACC ATTTTATAAG AAAATTTAAG AAAGAAACAG GCTTAACACC ACATCAGTTT CAAATTCAAA ATAAAATCAG AAGGGCCCAG AGAATTTTTA ATAATTCTGA AAATCTTGCC GAGCTTGCAA TAGAAACAGG TTTTTTTGAT CAAAGCCACT TTATCAGATA TTTCAAAAAA ATCGTTGGTC TTACACCGTC AGATTATAAA AAATCCTTTA AAATAGTATC ACATACATTC TAA
|
Protein sequence | MNKNSYYIYD KVSKTELVLY TDSSLSYPLH NHSSIFSIGI ILNGSIRLCK DGYSSIYTAG QIFIIPPYVP HALYSIGKAS LLTICINKNK ASEIDINKII NRIIFLYTKT FNLGSLSGTQ LLLLAENLSY CKHFSAYKSV TPQIKELRQI LEFSPEITIN IEKMAKSAYM SKYHFIRKFK KETGLTPHQF QIQNKIRRAQ RIFNNSENLA ELAIETGFFD QSHFIRYFKK IVGLTPSDYK KSFKIVSHTF
|
| |