| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_3162 |
|---|
| Symbol | |
|---|
| ID | 8598615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | - |
|---|
| Start bp | 3310559 |
|---|
| End bp | 3312025 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003309934 |
|---|
| Protein GI | 269121757 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0458111 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTAA TAGATATAAA AAATTTGACA TTTAGTTATG AAACAAGCTT TGAAAATATT
TTTGAGGATG TGTCTTTTCA GATTGATACA GACTGGAAGC TGGGATTTAT AGGAAGAAAC
GGTAGGGGAA AAACTACCCT GCTGAATCTT TTACTGGGAA AATATGATTA CAGGGGGAAA
ATTTCGGCAT CGGTAACATT TGATTATTTT CCTTTTGAGG TAGAGGATAA ATCACACACC
ACAATAGATA TAATTGATTC AATTAATAAC AGCTATGAAG TATGGGAGCT AAACAGAGAG
CTTTCACTGC TTGATGTGGA TCAGGATGTT CTGTACAGAC CGTTTGAGAC ACTAAGCAAC
GGAGAGCAGA CAAAGGTTCT GCTTGCAGCT TTATTTCTGA AAGAACAGAA TTTTCTTCTT
CTTGATGAGC CCACAAATCA TCTTGATGAA GAGGGAAAGG AAACAATAGC AGAATATCTC
AAGAAAAAGA AAGGATTTAT ACTTGTTTCA CATGACAGGG ATTTTCTGGA TAAAATTATA
GACCATGTAT TATCCGTTAA TAAAACAAAT ATAGATATTA TAAGAGGTAA TTTTTCCGAC
TGGAATCAGA AGAAGGAAAG AGAGGATAAT TTTGAAACAG CGGAAAATGA AAAACTGAAA
AAAGATATAA ACAGATTAAA GCAGGCGGCT AAGAGAACTT CTTCATGGTC TGAAAAAACT
GAGGAATCTA AATTTGGGAC AAAGGGAGTA GACAGAGGTT TTCTGGGGCA TAAATCTGCT
AAAATGATGA AAAAATCAAA AAGTATTGAA GCAAGGCAAA ATAAAGCAAT AGAAGAAAAA
TCAGGTCTTT TGAAAAATAT AGAAACTGCC GAAAATCTGA AGCTTCATCC TATGGTATAT
CCCAAGGGCT CTTTGGTTGA TGTAAGTGAT TTATCAATAT TTTATGGAGA TAAAATCTTA
TTTGAAGGAG TGGATTTTTC TGTTAGAAAT GGAGACAGAG CAGTAATAAA AGGAAAAAAC
GGTTCAGGGA AATCCAGTCT GATAAAGCTT CTTGCAGGAG AGGAAATACC CCATATGGGT
TTTATCAAGA CAGGAAGCGG ATTAACTATT TCGTATGTTC CGCAGGATGC TTCTTTTCTT
TCGGGAACTT TAAACTCATT TGCAGAGGAC AGGGGAATAA ATGAAACTCT TTTCAAATCA
ATATTGAGAA AACTGGATTT TGACAGGGGA CAGTTTGACA AAAGGATAGA TGAATACAGT
GAAGGACAGA AGAAAAAGGT TCTGCTGGCA GGCAGTCTCT GCGAATCGGC ACATCTTTAT
ATATGGGATG AGCCACTGAA TTTTATTGAT GTAATTTCTC GGATTCAGAT AGAAGAATTA
ATATTAAACT ATAATCCTAC ATTAATTTAT GTGGAACATG ACAGTGCATT CAACAGAAAA
ATTGCAACTA AAATAATAAA TTTATAA
|
|---|
| Protein sequence | MSLIDIKNLT FSYETSFENI FEDVSFQIDT DWKLGFIGRN GRGKTTLLNL LLGKYDYRGK
ISASVTFDYF PFEVEDKSHT TIDIIDSINN SYEVWELNRE LSLLDVDQDV LYRPFETLSN
GEQTKVLLAA LFLKEQNFLL LDEPTNHLDE EGKETIAEYL KKKKGFILVS HDRDFLDKII
DHVLSVNKTN IDIIRGNFSD WNQKKEREDN FETAENEKLK KDINRLKQAA KRTSSWSEKT
EESKFGTKGV DRGFLGHKSA KMMKKSKSIE ARQNKAIEEK SGLLKNIETA ENLKLHPMVY
PKGSLVDVSD LSIFYGDKIL FEGVDFSVRN GDRAVIKGKN GSGKSSLIKL LAGEEIPHMG
FIKTGSGLTI SYVPQDASFL SGTLNSFAED RGINETLFKS ILRKLDFDRG QFDKRIDEYS
EGQKKKVLLA GSLCESAHLY IWDEPLNFID VISRIQIEEL ILNYNPTLIY VEHDSAFNRK
IATKIINL
|
|---|
| |