Gene Sterm_2975 details

Gene Information

• Locus tag: Sterm_2975
• ID: 8598430
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: -
• Start bp: 3120665
• End bp: 3121393
• Gene Length: 729 bp
• Protein Length: 242 aa
• Translation table: 11
• GC content: 33%
• Product: PDZ/DHR/GLGF domain protein
• Protein accession: YP_003309749
• Protein GI: 269121572

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA TATTTTTAAT ATTATTTACA CTGCTGATAC TAGGATGCAG CAGTACAAAT 
CCTTATGCAG ACATGTATGT AAAGACATCA GAGCCTGATA TGGTAAGCAA TGATAAATTA 
CCTTTGGCTG ATTCGGACAT TACCGTTATT AATTCCAAAG ATACAAAGGA AGATATGGTG 
GATGTATACG AAAACGGTTA TGAAATGATA GGATATTCTT CTTTTAATAC CGGTGATTTA 
TCTGAAAAAT ATGTAAGAAC ACAGGCTTTG AATGTAGGCG CGACACTGGT AATATATTCC 
AAAAAATTCG TATCTCAGGA TTCAGAACTG GAACCCGTTT TCTTAAACGG TTTTTGTTAC 
GGAGGATACT ATTCAGTGAA CTGTACAGGC GCAGACTGGC AGTATGTACT GAAAAGCAGA 
TATGACTATC TTGCCACATT TTGGATAAAA ACAAAATTAA GCGGTTTGGG AATATTAGTG 
CGTGATATAA GTCAGGAAAA GAGAAAAGAG CTCGGGATAA ATTACGGAGT AGAGATTCAG 
GCAATAAGAA AAGATTCAGA AGCCCGTGAT GAGCTGGCAT TGGGAGATGT TATCATTAAA 
ATCGAAGAAA ATGATATTAA AAATAAAGAG GAATATAAAA AAATAACCGA TGAAAACAAA 
GGAAAAAAAA TAAAAATAGA AATACTAAGG AAAAACAAAA CAATCTCAAA AGAAATTAGT 
GTATTATAA 

 

Protein sequence

MKKIFLILFT LLILGCSSTN PYADMYVKTS EPDMVSNDKL PLADSDITVI NSKDTKEDMV 
DVYENGYEMI GYSSFNTGDL SEKYVRTQAL NVGATLVIYS KKFVSQDSEL EPVFLNGFCY 
GGYYSVNCTG ADWQYVLKSR YDYLATFWIK TKLSGLGILV RDISQEKRKE LGINYGVEIQ 
AIRKDSEARD ELALGDVIIK IEENDIKNKE EYKKITDENK GKKIKIEILR KNKTISKEIS 
VL