Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_2094 |
Symbol | |
ID | 8597559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 2222023 |
End bp | 2222859 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | |
Product | transcriptional regulator, RpiR family |
Protein accession | YP_003308879 |
Protein GI | 269120702 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTTAG AAAGCAATGA TTCCCGAATG AGCCTTATAA ATATACTTGA AGCGAATCTG GAAAAGGGAG ACAGCAAAGC AGTAATAGCA AGAGTACTTT TAAGAAATTT TTATAATATT CCAAATATGA CACAGGAGCA TATAGCAAAA TTAAGTTTTG TTGCTCCGTC AACAATAGGA AGGTTTTGCA AGAAAATCGG ATATAAGAAT TTTATCGAAT TCAGAAAATA TGTTAATGAA TACATAGAAA AATTAAAGAT GGACAGTATG CTCAGTGATG CATTTTACGA AGTTGCAGAC AAAGATGTTT TTAGTTTTTC AGATGAAATT TTCAGTTCGA CAATGAAAAG TCTGTATAAT GCGCAAAAAT CAATAGATAT CGAAACTATA GACAAAGTAA CCGATTTGAT AATAAGTACA GAGAAAATAG CGGTCTTCGG ACTTCCTATA TCACAGATAA TGGGTAAAGA CTTTCAGTAT CATATGTTAA GACACGGGAA ATATATGGAA GCATTTACTG AATTTAAAAA ACAGGTAGAG CTTGCAGAAT CACTTGATGA AAATTCACTT GCGATTTTTA TATCTAAAAC CGGCGGAGAA AGAAAATTCA TATGTGATAT TTTGAATATA GTAAAAAAGT GTAAAGCCAG AACTGTGCTG ATAACATATA AACAGGACAG CTATATGGCT CAAAACAGCG ATTTTCTTAT AAATATTTTT TATGAGGAAA ACGGACTAAT ACCAAGAGGG CTGATATCAG GAATACTTTA TACAGGTGTA TTTAATCTGA TAATTATGAA TTATTTGAAA AAAATCAAGA GCAAAGGCGG GAAGTAA
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Protein sequence | MDLESNDSRM SLINILEANL EKGDSKAVIA RVLLRNFYNI PNMTQEHIAK LSFVAPSTIG RFCKKIGYKN FIEFRKYVNE YIEKLKMDSM LSDAFYEVAD KDVFSFSDEI FSSTMKSLYN AQKSIDIETI DKVTDLIIST EKIAVFGLPI SQIMGKDFQY HMLRHGKYME AFTEFKKQVE LAESLDENSL AIFISKTGGE RKFICDILNI VKKCKARTVL ITYKQDSYMA QNSDFLINIF YEENGLIPRG LISGILYTGV FNLIIMNYLK KIKSKGGK
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