| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_2017 |
|---|
| Symbol | |
|---|
| ID | 8597483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 2147135 |
|---|
| End bp | 2148790 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | |
|---|
| Product | Uracil DNA glycosylase-like protein |
|---|
| Protein accession | YP_003308803 |
|---|
| Protein GI | 269120626 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.490669 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAA TATTGGATAA AAAGTTAATA AATGAAAAAG GATTAAAGGA TTTTGATCTG
GATCCTGTTA ATAAAGACCT TGTTGCTGTG GGGAAGAAGC TTTATTTTGT ATCGCAGGAT
TTGGAAGGAA AAGTAATTAT TAAGGAACTC GGCGGAAAAT TGAAGAATAT AGAGGGAGTA
AAATTTATAA AGGAAGAAAA TCAGCTCTTT GTATCAAATT CTTTTCTTGT TCTGACTATG
TACGGGGAGA TTTTCAAATA TTATGACAGA AAACATAAAG CGTCCAAAAC AGTGTTTTCT
ATGGAAAGAA CACCTGATTA TATAAATTTT ACCACAAATG GGAAGATAAT ATATCTGATG
GACGATACTC TTTATTCATA TAATCCTAAT TCCGAAATGA CTATAAAAAA GCCTGTTATT
AATAAAAATA ATGAAAACAG AGGGAAATAC AAAATATATG TAAACGGTGA AAATATAGTA
TTAAAGCATC GTGCACTTCA TTCACAGGAA AATACCATAA GTATTTTTGA TGAGAAGCTG
GAAGAGATTT TTAATATAAA AACTGTAAAA AATCATATAT ACTCAAGTAT ATCAGAACTT
CAATATATTG CAGGCACAGA AGACGGAGAA GTGGAAATAT GGGATGTGAT CACAAAAGAG
CTTTATAATT CCGTGAAGAT AAGCGACTAT CGCATATCTT ACATTGAAAA GACAAAGGAA
AATTACCTTC TAGGTCTCTC TTCGGGAGAA TTAATCATAA CAGACGAAAA ATTCAGAATA
GAGAAAAAGC TGAATCTTCA TAAAGGCGAT ATTTTGAAAA TAAAGGCCAA TGATGAAAGA
ATATTCACAC TTGGAATGGA TTATAATATA TTAAGTCTGA AAATATTGAA AAATGAGGAA
ACTGATATTG AAAGACGCGG CTTTATGCAG GAATATAATA TAAATGACGA ATATTTTGAG
TTTTTTACTT ATGAAAGAAT AGAAGCTGTA AGAAATTTTA TAAGAGAATT AAAAATAAAA
AATATATCAT ATAATCCAAA GGAAAATCTT ATATTTAAAG TATTTTCAGA GCCGCTTTCG
GAACAAAAAA TATGTATACC GGTAAAAGAG CCGTATACTC AGGGAAATAC CGCAACAGGA
CTTGCATTGG AAATGGAAAA AAATTCATGG ACTGATCCCG AACTGAATAA TTCTTTGAGA
AACATACTGA AATTGCTTTA TAAAACATAT ATGGGCACTT CAAAAGATTT GAATTATATA
AGGGAAGATA TAGAAAAGCA TATATTTAAT ATTCTTCCTC CGGACAAAAT TTTTAAATAC
TGGCAGAAAA ACGGAGTACT TCTTTTGAAT ACGGTTTTGA CAATTGCGGA AACAAAAGCA
GCTGATCATA GTAAATTTTG GACACCTTTT ACACAGGAAC TGCTGGAATT TATCTCAGAA
AAAAATAAAA ATATCACATA TTTTTTATGG GGAAAAGATG TGCAGGCATT TGAGAAAAAT
ATAAAAAGCG GAGAAATAAT CAAACATAAT CATCCGTCTG TATGGGGAAA TCCTGAAAAT
GAGAAAGATT TTTTGAACAG CAGCTCATTT GAGAAAACAA AAGGAATTAT AAACTGGCTT
GGGTGTGAAA TGGAACGAAA GACGACATTA TTTTAA
|
|---|
| Protein sequence | MKVILDKKLI NEKGLKDFDL DPVNKDLVAV GKKLYFVSQD LEGKVIIKEL GGKLKNIEGV
KFIKEENQLF VSNSFLVLTM YGEIFKYYDR KHKASKTVFS MERTPDYINF TTNGKIIYLM
DDTLYSYNPN SEMTIKKPVI NKNNENRGKY KIYVNGENIV LKHRALHSQE NTISIFDEKL
EEIFNIKTVK NHIYSSISEL QYIAGTEDGE VEIWDVITKE LYNSVKISDY RISYIEKTKE
NYLLGLSSGE LIITDEKFRI EKKLNLHKGD ILKIKANDER IFTLGMDYNI LSLKILKNEE
TDIERRGFMQ EYNINDEYFE FFTYERIEAV RNFIRELKIK NISYNPKENL IFKVFSEPLS
EQKICIPVKE PYTQGNTATG LALEMEKNSW TDPELNNSLR NILKLLYKTY MGTSKDLNYI
REDIEKHIFN ILPPDKIFKY WQKNGVLLLN TVLTIAETKA ADHSKFWTPF TQELLEFISE
KNKNITYFLW GKDVQAFEKN IKSGEIIKHN HPSVWGNPEN EKDFLNSSSF EKTKGIINWL
GCEMERKTTL F
|
|---|
| |