Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sterm_2016 |
Symbol | |
ID | 8597482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sebaldella termitidis ATCC 33386 |
Kingdom | Bacteria |
Replicon accession | NC_013517 |
Strand | + |
Start bp | 2146237 |
End bp | 2146965 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003308802 |
Protein GI | 269120625 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.47195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAAA TAAAATATGA CAAGATATAT GAAGACCTTA AGGAAAAAAT CGAGTCGGAA GTATATAAAA ACCAGCAAAA GCTTCCATCT GAAAATAATT TGGTAAAGGA ATATAAATGT TCGCGCAATA CATTAAGAAG AGCAGTGGCA CAGCTGGCAT CAAGCGGTTA TGTACAGAGC CTTCACGGAA AAGGTGTGTA TGTAATATAT GAACAGCATA AAAAACCGGA TTTCATGCTT GGGGATATTG AGAGCTTTAA AGAGGCCGGC ATAAGAAACA GCAGTGAAAA TAAAACAAAA GTTGTCTGTT TTTCCGAGCT GACTGCTGAT GAGAGCATAA GCAGAAAAAC TGGTATTCCT GAAGGAACTG ATATATATTA TATTCAGAGA GTAAGATTTA TGGACAGTCA GGCATTGATA ATAGACCATA ATTATTACAG GAAAGATATA GTAAAGGATC TTACCCTGGA GATAGCAGAG GATTCCATAT ATGAATATAT AGAAAACGAG CTGAATGAAA AGGTAATTAC GACCAAACGT ATTATTACCG TGGAAAAAGC CGGAAAAGAC GATTTCAGAT ACCTGAATCT CCAAGAATAT AACTGTGTAG CGGTAATAAG TAATTATACC TATAATGCTG ACGGGATAAT GTTCGAGTAT ACGCAGTCAA GACACAGACC GGATTATTTT ATGTTTTTCG GGCAGGCGCA GAGAATAAAA AAGAGCTGA
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Protein sequence | MGKIKYDKIY EDLKEKIESE VYKNQQKLPS ENNLVKEYKC SRNTLRRAVA QLASSGYVQS LHGKGVYVIY EQHKKPDFML GDIESFKEAG IRNSSENKTK VVCFSELTAD ESISRKTGIP EGTDIYYIQR VRFMDSQALI IDHNYYRKDI VKDLTLEIAE DSIYEYIENE LNEKVITTKR IITVEKAGKD DFRYLNLQEY NCVAVISNYT YNADGIMFEY TQSRHRPDYF MFFGQAQRIK KS
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