| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sterm_1953 |
|---|
| Symbol | |
|---|
| ID | 8597420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sebaldella termitidis ATCC 33386 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013517 |
|---|
| Strand | + |
|---|
| Start bp | 2084961 |
|---|
| End bp | 2086538 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_003308740 |
|---|
| Protein GI | 269120563 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATAT CTGATATCCT AAAAGAATTA GCAGTAAAAA TACCTAATAA AACTGCTGTT
ATAGATACTA AAACTTCATC AAGAATTTCA TTTAATTATC TGGAAAAAAA TTCATCAAAA
ATAGCTAATA TGTTTAAAAA GGCAGGTCTT CAGGAAGGGG ACGGAGTTCT GATATTTGTT
CCGATGTCTG TAGAGTTATA TTCTATACTG GCAGCAGTAT TTAAAATGAA GCTTGTAGCA
GTATTTATTG ATCCTTATGC AGATTCAAAA CATATAAAAA ACTGCTGCCA GATATACACT
TCAAAGGCTC TTATAATTTC AGGGAAAAAA GCAGGGCTTC TCTGCTATAT GAACAGTGAA
ATAAGAAAAA TACCTAATAA ATATATAATT AACGGAAAAA TGCCGGGATT TAGAAAATTT
TCCGAATATG AAGATCAGTC CTTTGACTTT GCATGTACTG AAACAGCTCC TGACACAAAA
GCACTTGTTA CATTTACGAG CGGGAGTACG GGAAAACCCA AGGGACTTGT AAGAACACAC
GGCTTTCTTG CCGCCCAGCA GAAGGTACTG GAAAAAAGTC TGGAAATATC TGAAAACAGC
AAGGTTTTGA CGGCATTCCC CGTGTTCATA TTATCAAATA TGTACAGCGG GCTGACAAGT
ATAATTCCGA ATACAGACCT GAGAAAAATA GGGGAGACTG ACGGTGGTAC TATCAGCGGT
CAGATAATGT CTGAAAGTAT AGATACAATA CTTGCGCCGC CTTCATTTTT TGATAATCTG
GTTGAGATTC ATAAAAATAC AGGAAGAAGC ATACACAGCA TAAAAAAAAT TATTACAGGA
GGAGTACCGG TATTTCCTGA AATTATGGAA AATTTGAAAA AATCATTTCC TTATGCAGAA
ATAAAAGTAG TTTACGGCTC ATCAGAGGCT GAACCAATGT CAGAATTATG CTATAATGAA
TTAAATGAAA ATGATATACA AAAAATGAAA AACGGAAACG GACTTCTTGC CGGAACGATT
GTTGAAGATA TAAATTTGAA AATAATAGAA AACGATCAGA AGCTGAGTCA GGGAGATCAG
ATAAAAATGC TGGAGCAGGG GGAAAAAGGA GAAATTATCG TATCAGGCGG ACATGTACTG
GATACTTATC TGGAGGCTGA AGAAAATAGT AAGATAAAAA TAACAGCTGA TAATGAGAAT
TGGCATAGAA CAGGAGATCT GGGCTATATA GATGCTTCAG GAAGACTCTG GCTTTTGGGG
AGAGCAAAAG CGGAAATCTC CAGAGGCAGT GAAAAAATAT ATCCTTTTTC CATAGAGACA
ATGCTTTCTT TTGAAAAAGA TATAAAAAGA ACGGCAATTA TAAGTAAAAA AGGGAAGATA
CTTCTGTTTA TAGAGATTTT TTATACAGAG GATAAAGAAA AACAGCTTCA GATTCAGGAT
AAGCTGGAAG AAAAAATAAA AGAATTGAAA ATTACTGTAG ATAAAGTAAT TTTTGCTGAT
AAAATTCCGG TGGATAAAAG GCATAATGGT AAAATAGACT ACGGCAGTCT GGAAAGATTA
TCCGAAAAAT ATATATAG
|
|---|
| Protein sequence | MNISDILKEL AVKIPNKTAV IDTKTSSRIS FNYLEKNSSK IANMFKKAGL QEGDGVLIFV
PMSVELYSIL AAVFKMKLVA VFIDPYADSK HIKNCCQIYT SKALIISGKK AGLLCYMNSE
IRKIPNKYII NGKMPGFRKF SEYEDQSFDF ACTETAPDTK ALVTFTSGST GKPKGLVRTH
GFLAAQQKVL EKSLEISENS KVLTAFPVFI LSNMYSGLTS IIPNTDLRKI GETDGGTISG
QIMSESIDTI LAPPSFFDNL VEIHKNTGRS IHSIKKIITG GVPVFPEIME NLKKSFPYAE
IKVVYGSSEA EPMSELCYNE LNENDIQKMK NGNGLLAGTI VEDINLKIIE NDQKLSQGDQ
IKMLEQGEKG EIIVSGGHVL DTYLEAEENS KIKITADNEN WHRTGDLGYI DASGRLWLLG
RAKAEISRGS EKIYPFSIET MLSFEKDIKR TAIISKKGKI LLFIEIFYTE DKEKQLQIQD
KLEEKIKELK ITVDKVIFAD KIPVDKRHNG KIDYGSLERL SEKYI
|
|---|
| |