Gene Sterm_1547 details

Gene Information

• Locus tag: Sterm_1547
• ID: 8597017
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 1646962
• End bp: 1648941
• Gene Length: 1980 bp
• Protein Length: 659 aa
• Translation table: 11
• GC content: 41%
• Product: transketolase
• Protein accession: YP_003308337
• Protein GI: 269120160

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.45317
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAA ATGTAAAACA ATTGTCAGTA GATGCAATAA GAATGCTGGG AGTGGATGCG 
ATAGAGAAGT CAAAGTCAGG ACATCCGGGA ATAGTATTAG GTGCGGCACC TATGGCGTAC 
ACACTTTGGA GCGAACACCT TAACGTGAAT CCAAAAGAAC CTGAATGGCT GAACAGAGAC 
AGATTTGTAC TGTCAGCTGG ACACGGATCG ATGTTAATAT ATTCATTATT ACATTTAAGC 
GGTTTTGATG TGTCTATGGA AGACATAAAG AATTTCAGAC AGTGGGGCTC TAAGACACCG 
GGACATCCTG AGTTCGGACA TACAAAAGGA GTGGACACGA CAACAGGTCC CCTTGGACAG 
GGAATCGCCA CAGCGGTGGG AATGGCACTG GCAGAAACAC ATCTTGCGAA AAAATATAAT 
AAAGAAGATA TGAATATAAT AGATCACTTT ACATATGTAA TCTGCGGAGA CGGAGATCTT 
ATGGAAGGTG TGAGCGGAGA GGCAAGTTCA TTTGCAGGAG TACAGAAGCT GGGGAAGCTG 
GTAGTACTTT ATGATTCCAA TGATATATGT CTTGACGGTG AAACAAGAGA AACATTTACA 
GAAGATGTGG CTAAGAGATA TGAAGCTTAC GGCTGGCAAG TACTAACGGT AAAAGACGGC 
AATGATCTTG GAGCAATAGA TGCGGCAATA AAAGAAGCAA AGAAAGATGT AACAAAGCCG 
ACATTAATAG AGATAAAAAC AGTAATAGGA TACGGAGCAC CAACAAAAGC AGGAAAGAAC 
AGTTCACACG GGGCACCTTT GGGAGCAGAG GAAACAAAAG GATTAAGAGA ATATCTGAAA 
TGGGACTATG AAGCATTTGA AGTTCCGGCA GAGGTATATG AGGACTATAA GAAATCAGTA 
GCAGAAAGAG GAGCGGCAAA GTCAGAGGAA TGGAAAGCCC TTGTAGGAAA GTATAAGGAA 
AAATATCCTG AGCTGGGAAA AGAGATAGAA GAAATAGCAG CAGGAACATT ATTTGATAAT 
ATAAAGATAG AATTCCCGGC ATATGAAGCA GGACATTCAC AGGCAACAAG AAATGCATCA 
AATGATGCGA TAAATGCAAT AGCAGGACAG ATACCGAATT TCATAGGAGG CTCGGCAGAC 
TTAGCACATT CAAATATGAC AATGATAAAA GGAGAAGGAC TGTTTGACGC AGAGCACAGA 
GAAAACAGAA ATATTCAGTT TGGAGTAAGA GAATTTGCAA TGGGAGCGAT ACTGAACGGA 
ATGGTATTAC ACGGAGGACT GAAGACATTC GGGGGAACAT TCTTTGTATT CAGTGACTAT 
GTGAAGGCAG CAATAAGATT ATCAGCATTA ATGGGATTAC CGGTAACTTA TGTACTTACC 
CATGACAGTA TAGCAGTAGG AGAAGACGGT CCGACACATG AACCGATAGA ACAGCTTGCA 
GGTTTAAGAG CAATTCCGAA CATAAATGTA ATAAGACCAG CAGACAGCAG AGAAACACAG 
GGAGCATGGA AGGTAGCTGC AGAAAGTAAG AAGACACCGA CACTTTTAGT ATTAAGCAGA 
CAGAATCTGG ATGTAACAGA AGGTTCGTCA ATGGAAGATG TAGCAAAGGG AGCATATGTA 
TCTTACGAGA CAAACAAAGA TTTTGGAAGA ATAATAATAG CAACAGGATC AGAAGTATCT 
CTGGCAGTGG GAGCAGCAAA GGAACTGGAA AAATCAGGAG AATCAGTAAG GGTAGTAAGT 
ATGCCGAGTA TGGAGCTTTT TGAAAGACAG AGCTGTGAGT ATAAGGAAAG TATCCTTCCA 
AAAGGAGTAA GAAGCAGAGT ATCACTTGAG ATGGGATCGA CATTCGGATG GCATAAATAT 
GTAGGAATGG ACGGACTGGC AATAGGAATA GATACATTCG GAGCATCAGC ACCGGCAGGA 
AAAGTAATAG AAGAATACGG ATTTACAGTA GAAAAAATCG TTAATAAAAT AAAAGGATAA 

 

Protein sequence

MEKNVKQLSV DAIRMLGVDA IEKSKSGHPG IVLGAAPMAY TLWSEHLNVN PKEPEWLNRD 
RFVLSAGHGS MLIYSLLHLS GFDVSMEDIK NFRQWGSKTP GHPEFGHTKG VDTTTGPLGQ 
GIATAVGMAL AETHLAKKYN KEDMNIIDHF TYVICGDGDL MEGVSGEASS FAGVQKLGKL 
VVLYDSNDIC LDGETRETFT EDVAKRYEAY GWQVLTVKDG NDLGAIDAAI KEAKKDVTKP 
TLIEIKTVIG YGAPTKAGKN SSHGAPLGAE ETKGLREYLK WDYEAFEVPA EVYEDYKKSV 
AERGAAKSEE WKALVGKYKE KYPELGKEIE EIAAGTLFDN IKIEFPAYEA GHSQATRNAS 
NDAINAIAGQ IPNFIGGSAD LAHSNMTMIK GEGLFDAEHR ENRNIQFGVR EFAMGAILNG 
MVLHGGLKTF GGTFFVFSDY VKAAIRLSAL MGLPVTYVLT HDSIAVGEDG PTHEPIEQLA 
GLRAIPNINV IRPADSRETQ GAWKVAAESK KTPTLLVLSR QNLDVTEGSS MEDVAKGAYV 
SYETNKDFGR IIIATGSEVS LAVGAAKELE KSGESVRVVS MPSMELFERQ SCEYKESILP 
KGVRSRVSLE MGSTFGWHKY VGMDGLAIGI DTFGASAPAG KVIEEYGFTV EKIVNKIKG