Gene Sterm_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_1348 
Symbol 
ID8596824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp1434621 
End bp1435439 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content20% 
IMG OID 
Productpentapeptide repeat protein 
Protein accessionYP_003308144 
Protein GI269119967 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGAATAT ATACTAATTC AGATGAAGCA ATTTTAAATT TAGATATAAT TAGTTTAGAA 
AGTCAAAATA TTAAGGGAAT AAATTTTCAC AGAGCTTTTC TGGATAAAAT AAAAATAAAG
AAAACTTTTG TAGAAAATTC AGATTTTAGA AATGCTATTT TTAATGATAC AATTATTATA
AATTCTAGTT TCAAAGATAG CGTATTTATA ATGTCAGAAT TTGAAAATGT AAGGATATCG
AATTCAAATT TTGAGAATTG TAAAATGAGA TTTTCAAACT TTCAAAATTC TCTTATAACT
GATACATATT TTAAAAGCAG TGATATGAAA ACTGCAAATT TTAAAAACAC AATACTATTT
AACACAATAT TTGAAAATAT CGAAAATTCG CAAAGTATTA ATTTTGATAA TGCATATTAT
AATATAAAAA CTCAGTTACC AAAGGGGGTA GATCCAAAAG AGAAAAAAAT GCTATTTATT
GATAACGAAA TTGATGAAAA GTATATTATA ATAAAAAAAG AATTTAATAA TAATAAAAGT
TATGATGAAA AACATCCTTT AAGAGAATTT GATATTTTTG TGAAAAATAA TTTGAATAAC
TTAAATAAAG ATGACAACAA TAGTTTTCTT TTACATTTGA TACTAAGTAA TATTATATTA
CAGTATAAAG TTATATTTAA AGACTTTGCA GATAGAACTG ATAAATTTAT AAAAAATAGA
AATACATATC TTAAAGATTA TTCTAATAAG AATAGAGAAA AAATAAAATT ACTAATTGAA
AATTATAATG AAAATATACA ATTGAGTCGA AAATACTGA
 
Protein sequence
MRIYTNSDEA ILNLDIISLE SQNIKGINFH RAFLDKIKIK KTFVENSDFR NAIFNDTIII 
NSSFKDSVFI MSEFENVRIS NSNFENCKMR FSNFQNSLIT DTYFKSSDMK TANFKNTILF
NTIFENIENS QSINFDNAYY NIKTQLPKGV DPKEKKMLFI DNEIDEKYII IKKEFNNNKS
YDEKHPLREF DIFVKNNLNN LNKDDNNSFL LHLILSNIIL QYKVIFKDFA DRTDKFIKNR
NTYLKDYSNK NREKIKLLIE NYNENIQLSR KY