Gene Sterm_0794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0794 
Symbol 
ID8596277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand- 
Start bp878105 
End bp878764 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content30% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003307597 
Protein GI269119420 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.133446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACAG ATTTAAGAAT TTTAGCATAT AATTATATAA AAGATAAAAT ATTAAATAAT 
GAATATGCCT CAAACCAGAT AATAAGCGAA AAAATGATAT CCGATGAACT TTCTATCAGC 
AAGACCCCGG TTAAAGAAGC CTTTTTATAT CTGGAAAGCG AAAATTTTTT AATTATTAAT 
CCGAGAAAAT CTGTTTCTGT ACGGGAAGTA GATCTAAAGC TGATAAAAGA TGTTTTTCAG 
GTTCGTTCAA GAATCGAACC GCTGATTGTA GAGCTTACCA TAAATTCTAT GGATAAGGAA 
ATGCTGACAA AATCTCTTTT GGATTTCAAA GAGAAATTCA AAAAAATGTC GTCTGTTAAA 
ATTGTTGATA ATGATGAATT TGATATATTG TATGACAGCT ACAGACATTT TTTCGCAGAT 
AATTGTGCCA ATCTTTTCTT TTCCAGTCAG ATGAATCTTG TTTATGATCA TCTTCACCGT 
ATCAGAAAAG TTTTATATGG AAATAATATG AGAAGGCTGA AAGCTCTGGA AGAGCATATT 
TATATAATTG ACTGTATTTT AGATAATAAC TCTGCAGAGT TCATAAAGGA ACTTTGTGAA 
AAGCATATTG AAGAAGCTCA GATGGACTTC TTTAAAAACC TTGATAATCT AAATCTTTAA
 
Protein sequence
MKTDLRILAY NYIKDKILNN EYASNQIISE KMISDELSIS KTPVKEAFLY LESENFLIIN 
PRKSVSVREV DLKLIKDVFQ VRSRIEPLIV ELTINSMDKE MLTKSLLDFK EKFKKMSSVK 
IVDNDEFDIL YDSYRHFFAD NCANLFFSSQ MNLVYDHLHR IRKVLYGNNM RRLKALEEHI 
YIIDCILDNN SAEFIKELCE KHIEEAQMDF FKNLDNLNL