Gene Sterm_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0562 
Symbol 
ID8596046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand+ 
Start bp612982 
End bp613575 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content28% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003307366 
Protein GI269119189 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00242532 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAA AGGATGTAAT TAAAATAACG TTGGAACTGA TAAAAGAGAA GAAGCTGGAA 
AAGACCTCAA TAGGGGAAAT AGTGAAAAAA CTGGATTCAA GTCCGGGAAA TCTGTATTAT 
CATTTCAAAA GTAAAAATGA GATTTATAAA GAAACAGCGG ATTATTCTTA TACTGAAATA 
ATAAAAAGCC TGAATAATGT AAAATCAGAA AATAACAGGC AGAGTTATTT ATTCAGACTG 
ACAAAAACAC TGATAAAATT TTTTGAAGAG AGGGAAGATA TATTATATTT TCTGATGAGT 
ATAAGAGGCT CATATTTCTT TGATAAAGAA TCAGGTCAGC AGAATTTTTT AGCAAAATTT 
CAAAAAATAC TATCTGAGGA AAAACCAAAT ACTGAACAAG AGAAACAAAT ATCATTAAAG 
CTGAATATGT TTTTGGGCTC TGTATATGAA GTGCTGTATG TAAATAAATT AGTAAATAAG 
AGAAATTTAA ATGAAGAAGA AATAAAAGAG ATGTGTATGT CATTCTGGGG AAACATAGAA 
ATGGAAAATT ATAAAACATG TGAGCAGAAT AGTCTGAAAG TAGGATTATC TTAG
 
Protein sequence
MDKKDVIKIT LELIKEKKLE KTSIGEIVKK LDSSPGNLYY HFKSKNEIYK ETADYSYTEI 
IKSLNNVKSE NNRQSYLFRL TKTLIKFFEE REDILYFLMS IRGSYFFDKE SGQQNFLAKF 
QKILSEEKPN TEQEKQISLK LNMFLGSVYE VLYVNKLVNK RNLNEEEIKE MCMSFWGNIE 
MENYKTCEQN SLKVGLS