Gene Sterm_0554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSterm_0554 
Symbol 
ID8596038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSebaldella termitidis ATCC 33386 
KingdomBacteria 
Replicon accessionNC_013517 
Strand
Start bp600274 
End bp601155 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content31% 
IMG OID 
Productprotein of unknown function DUF1311 
Protein accessionYP_003307358 
Protein GI269119181 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTAAAT CAAAAAAAAT TTTTCTTTTT CTTTTATTTT TTTCTTTAAT TTCCTGTAAG 
AACAATATCT TTAACAAGAT ATTAGATAAA AAAACAAAGC AGACAGACAG TATAGAAAAA
AATAAAGCTG ATTCAGTTAA TCAGAAGATA GAAAAAATAG TCAGAAAATG GAATAGTGCC
ACGAGCAACA AGGATATTAC AGCATTAGAA TCAATACTGG CTGATAAAAT AGAGTATTAT
CAGCAAACAG TTACCAAAGC AGAGTATATT TCAGACAAAA AGAAGTTTTT TGAAAAAAAT
AATATTTATG GTCAGGAAAT AAAAGGGGAT ATTGAATATA AAATTCTTTC AGAGAGACAG
GTTAAGGTTG ATTTTTTGAA AGAAGTAACC ACGAAAAACG GAACAAATGA CTACCCGTCA
TACCTTATTT TTGAAAATAT AAACGGAGAC TGGAAATTAG TTTTGGAAAG TGACCTGATT
TCAGATGAAA ATATAAAGAA AAAAAAGAGT GTCTCCAAAA ATACAAATTA TGAAAAAAAT
CTGATTGCAA AAATGAAGCC TGTTGATCAG GAATTAGATG ATATGCTGTC CTATTCACAG
TCAACTGCTG ATATGACTGC TGCTATAAAT TATGCTTCCG GAGCATGGGA TACAGAGCTT
AATATTATTT ATAAGCTTTT AATGGAAAAA CTTTCAAAAG AGGAACAGAT TTCATTAAGA
GACAAACAGC GGAACTGGAT AAAAATGAGA GACTCCAAAA TAAATGAAGC AGCTGCTGAA
TTTGAAGGCG GTTCAATGGG CAGAGTCACC GGGAGAAGTG TATTTTTAGA GGAAACAAAA
AAGAGAACAC TGGAATTATC CAGAATTTAT GACAGTTTGT AA
 
Protein sequence
MSKSKKIFLF LLFFSLISCK NNIFNKILDK KTKQTDSIEK NKADSVNQKI EKIVRKWNSA 
TSNKDITALE SILADKIEYY QQTVTKAEYI SDKKKFFEKN NIYGQEIKGD IEYKILSERQ
VKVDFLKEVT TKNGTNDYPS YLIFENINGD WKLVLESDLI SDENIKKKKS VSKNTNYEKN
LIAKMKPVDQ ELDDMLSYSQ STADMTAAIN YASGAWDTEL NIIYKLLMEK LSKEEQISLR
DKQRNWIKMR DSKINEAAAE FEGGSMGRVT GRSVFLEETK KRTLELSRIY DSL