Gene Sterm_0535 details

Gene Information

• Locus tag: Sterm_0535
• ID: 8596020
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sebaldella termitidis ATCC 33386
• Kingdom: Bacteria
• Replicon accession: NC_013517
• Strand: +
• Start bp: 586301
• End bp: 586969
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 36%
• Product: binding-protein-dependent transport systems inner membrane component
• Protein accession: YP_003307340
• Protein GI: 269119163

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTTT CATCAACAAG ATTATTTGAA TATATTCCTA AAATTATTGT TCCGGCTTTA 
TTTGCCACAT TAAGAATGCT GCTGTTTTCC ATGCTTATTT CAGTTATATT TGGAACAATA 
ATCGGAATTA TATTGACAGT AACAGGGTCG GGTGATTTGA AGGAGAATAA AAAAATATAT 
AATACTGTTG GTTTTTTCGT AAATACAATA AGAGCTTTTC CGGTTATTAT CCTAATAGTG 
GCAATTACTC CGCTGACTAA ATTTATAGTC GGAACATCAA TAGGAGAACA GGCGGCCATT 
GTTCCGCTGA GTATAGCAGC TACACCTGTT ATAGCAAGAC TTATACAGAA TAGCTTTGAC 
GAAGTAGACA GGGATCTCAT AATAGCGGCT AAATCCTTCG GAGCGAGTAC AATACAGATT 
ATATTTAAGG TTTTATTTGT TGAGGCTCTT CCGTCTATTA TTTCCGGACT TACAACAACA 
ACGATTTTAT TTCTGGGGTC GATTACTCTG GCAGGAGCCG TGGGTGCCGG AGGACTTGGA 
GCCGTGGCTT TGACATATGG TTATCAGCGT TTTGATGATG CTGTAATGTA CACAATAGTA 
TTTATATTAT GTATTCTGGT TTTTTTAATT CAGGGTACCG GAAGTTTATT ATATAAAAAA 
TTAAAATAG 

 

Protein sequence

MNFSSTRLFE YIPKIIVPAL FATLRMLLFS MLISVIFGTI IGIILTVTGS GDLKENKKIY 
NTVGFFVNTI RAFPVIILIV AITPLTKFIV GTSIGEQAAI VPLSIAATPV IARLIQNSFD 
EVDRDLIIAA KSFGASTIQI IFKVLFVEAL PSIISGLTTT TILFLGSITL AGAVGAGGLG 
AVALTYGYQR FDDAVMYTIV FILCILVFLI QGTGSLLYKK LK